RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 RAB3IPQ96QF0 476 aaPredicted RBP12.67□□□□□ -0.38
SIRPA-201ENST00000356025 TUT1Q9H6E5 874 aaKnown RBP12.67□□□□□ -0.38
SIRPA-201ENST00000356025 CYTH4Q9UIA0 394 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 USH1CQ9Y6N9 552 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 CNTNAP2Q9UHC6 1331 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 MYO18AQ92614 2054 aaKnown RBP12.67□□□□□ -0.38
SIRPA-201ENST00000356025 PPEF2O14830 753 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 HAUS5O94927 633 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 AMPD1P23109 780 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 ABCD1P33897 745 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 ATXN3P54252 364 aaPredicted RBP12.67□□□□□ -0.38
SIRPA-201ENST00000356025 DPYSL3Q14195 570 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 KLHL38Q2WGJ6 581 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 CELF3Q5SZQ8 465 aaKnown RBP12.67□□□□□ -0.38
SIRPA-201ENST00000356025 TRABD2AQ86V40 505 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 TEX2Q8IWB9 1127 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 WDTC1Q8N5D0 677 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 CPT1BQ92523 772 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 USP6NLQ92738 828 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 TXLNGYQ9BZA5 131 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 PCDH9Q9HC56 1237 aa12.67□□□□□ -0.38
SIRPA-201ENST00000356025 NFASCO94856 1347 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 KCNK1O00180 336 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 TMEM63AO94886 807 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 STBD1O95210 358 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 MYL3P08590 195 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 EPHB1P54762 984 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 CACNB2Q08289 660 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 PID1Q7Z2X4 250 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 DCLK2Q8N568 766 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 CLEC4CQ8WTT0 213 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 SDCBP2Q9H190 292 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 ZNF395Q9H8N7 513 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 PRMT7Q9NVM4 692 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 SNCAIPQ9Y6H5 919 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 LOC100653049A0A140TA62 436 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 KRT34O76011 436 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 KRT37O76014 449 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 AP3M2P53677 418 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 RSPH3Q86UC2 560 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 VCPIP1Q96JH7 1222 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 SLC17A6Q9P2U8 582 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 HOXC6P09630 235 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 EIF4BP23588 611 aaKnown RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 OAZ1P54368 228 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 ZNF280AP59817 542 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 CCDC142Q17RM4 750 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 RWDD4Q6NW29 188 aaKnown RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 FAM161BQ96MY7 647 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 PGLYRP2Q96PD5 576 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 TTC1Q99614 292 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 FERMT1Q9BQL6 677 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 RSAD1Q9HA92 442 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
SIRPA-201ENST00000356025 NHSQ6T4R5 1651 aa12.66□□□□□ -0.38
SIRPA-201ENST00000356025 UGT1A9O60656 530 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 TOP3BO95985 862 aaKnown RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 SERPINB3P29508 390 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 CHI3L2Q15782 390 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 CA9Q16790 459 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 GBP7Q8N8V2 638 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 HASPINQ8TF76 798 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 CENPTQ96BT3 561 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 MRPL45Q9BRJ2 306 aaKnown RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 UGT1A7Q9HAW7 530 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 UGT1A10Q9HAW8 530 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 UGT1A8Q9HAW9 530 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 SIGLEC16A6NMB1 481 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 CYB561D2O14569 222 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 ENTPD5O75356 428 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 DCTN3O75935 186 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 MYCP01106 439 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 LGALS2P05162 132 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 NXNQ6DKJ4 435 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 RAPH1Q70E73 1250 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 RFWD2Q8NHY2 731 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 SMG5Q9UPR3 1016 aaKnown RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 SRGAP2BP0DMP2 458 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 MYL2P10916 166 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 ASPAP45381 313 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 TAP1Q03518 808 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 MCL1Q07820 350 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 NBPF20Q3BBV1 942 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 CAPRIN2Q6IMN6 1127 aaKnown RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 OTOAQ7RTW8 1153 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 RIOX2Q8IUF8 465 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 ANKRD13AQ8IZ07 590 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 UNC5BQ8IZJ1 945 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 C12orf50Q8NA57 414 aaPredicted RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 TMEM134Q9H6X4 195 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 RXFP1Q9HBX9 757 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms