RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CYP2F1P24903 491 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 MIPP30301 263 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 TKTL1P51854 596 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 EPHB4P54760 987 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 YWHAZP63104 245 aaKnown RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 HTRA4P83105 476 aaPredicted RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 GPR17Q13304 367 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 LONRF2Q1L5Z9 754 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 C15orf59Q2T9L4 293 aaPredicted RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 SLC39A12Q504Y0 691 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 GLE1Q53GS7 698 aaKnown RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 RAB6CQ53S08 254 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 SEL1L2Q5TEA6 688 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 ZNF280DQ6N043 979 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 VSTM1Q6UX27 236 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 ANKS3Q6ZW76 656 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 CYP4V2Q6ZWL3 525 aaPredicted RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 OTOP2Q7RTS6 562 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 GPRIN1Q7Z2K8 1008 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 BNIPLQ7Z465 357 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 ANKS1BQ7Z6G8 1248 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 CEP57Q86XR8 500 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 SPATA2LQ8IUW3 424 aaPredicted RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 SLC39A11Q8N1S5 342 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 B3GALT6Q96L58 329 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 CFAP57Q96MR6 1250 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 NCAPGQ9BPX3 1015 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 HERPUD2Q9BSE4 406 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 LRRC1Q9BTT6 524 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 PLVAPQ9BX97 442 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 PARD6BQ9BYG5 372 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 ADAM33Q9BZ11 813 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 ULBP1Q9BZM6 244 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 RAB6CQ9H0N0 254 aa11.51□□□□□ -0.57
ECM1-201ENST00000346569 DMAP1Q9NPF5 467 aaPredicted RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 DDX56Q9NY93 547 aaKnown RBP11.51□□□□□ -0.57
ECM1-201ENST00000346569 TCRBV7S2A1N4TA0A589 114 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 CARNS1A5YM72 827 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 C3orf70A6NLC5 250 aaPredicted RBP11.5□□□□□ -0.57
ECM1-201ENST00000346569 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
ECM1-201ENST00000346569 VNN2O95498 520 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 ZBED1O96006 694 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 KRT7P08729 469 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 TFE3P19532 575 aaPredicted RBP11.5□□□□□ -0.57
ECM1-201ENST00000346569 NOS2P35228 1153 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 MATKP42679 507 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 MAGEA11P43364 429 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 COPS2P61201 443 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 SMARCB1Q12824 385 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 TAZQ16635 292 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 HADHQ16836 314 aaKnown RBP11.5□□□□□ -0.57
ECM1-201ENST00000346569 USP41Q3LFD5 358 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 FAM117BQ6P1L5 589 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 MFSD7Q6UXD7 560 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 DEFB106AQ8N104 65 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 PRELID2Q8N945 189 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 PIK3R5Q8WYR1 880 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 IRGQQ8WZA9 623 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 RAPGEF5Q92565 580 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 C8orf48Q96LL4 319 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 SLC2A13Q96QE2 648 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 AP1M1Q9BXS5 423 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.5□□□□□ -0.57
ECM1-201ENST00000346569 IL37Q9NZH6 218 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 DMGDHQ9UI17 866 aaKnown RBP11.5□□□□□ -0.57
ECM1-201ENST00000346569 RAB21Q9UL25 225 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 USP18Q9UMW8 372 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 PCDHB5Q9Y5E4 795 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 BACE2Q9Y5Z0 518 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 VWA8A3KMH1 1905 aa11.5□□□□□ -0.57
ECM1-201ENST00000346569 TARSL2A2RTX5 802 aaKnown RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 YJEFN3A6XGL0 299 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 E7ENQ6 273 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SART1O43290 800 aaKnown RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 HSF2BPO75031 334 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 GJB5O95377 273 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SOD2P04179 222 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 USP17L7P0C7H9 530 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 RHOXF2BP0C7M4 288 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 LINC00271P0C7V0 271 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 RARAP10276 462 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 KDELR1P24390 212 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SDC4P31431 198 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 PTPN7P35236 360 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SSR1P43307 286 aaKnown RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 ARSEP51690 589 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 HDAC4P56524 1084 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 FPGSQ05932 587 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 KLF1Q13351 362 aaPredicted RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 BTG3Q14201 252 aaPredicted RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 PPP2R5EQ16537 467 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 CYP1B1Q16678 543 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SLC25A52Q3SY17 297 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 BOLA3Q53S33 107 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SLC8B1Q6J4K2 584 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 STRADAQ7RTN6 431 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SIX6OS1Q8N1H7 587 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms