RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OSCP1Q8WVF1 389 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 IL37Q9NZH6 218 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 CPQQ9Y646 472 aa16.65■□□□□ 0.26
TSPAN4-201ENST00000346501 DENND4CQ5VZ89 1909 aa16.64■□□□□ 0.26
TSPAN4-201ENST00000346501 MUC6Q6W4X9 2439 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 ARNTLO00327 626 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 BEST1O76090 585 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 NFATC1O95644 943 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 OAS1P00973 400 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 TPM2P07951 284 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 RALAP11233 206 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 CTHP32929 405 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 BCAT1P54687 386 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 GCNT1Q02742 428 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 TCF15Q12870 199 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 USP4Q13107 963 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 ZNF77Q15935 545 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 DGKKQ5KSL6 1271 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 SNX30Q5VWJ9 437 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 GBP6Q6ZN66 633 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 ENOSF1Q7L5Y1 443 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 C1orf210Q8IVY1 113 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 ARHGAP18Q8N392 663 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 ANKRD52Q8NB46 1076 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 ZMIZ2Q8NF64 920 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 LRRC3BQ96PB8 259 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 SLC22A12Q96S37 553 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 CDK5RAP1Q96SZ6 601 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 FAM83CQ9BQN1 747 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 UBXN6Q9BZV1 441 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 INTS2Q9H0H0 1204 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 EBF3Q9H4W6 596 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 GMIPQ9P107 970 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 TBC1D14Q9P2M4 693 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 SCML2Q9UQR0 700 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 SH3BP1Q9Y3L3 701 aa16.64■□□□□ 0.25
TSPAN4-201ENST00000346501 GREB1Q4ZG55 1949 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 FAM92AA1XBS5 289 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 LEFTY2O00292 366 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 PES1O00541 588 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 TLR5O60602 858 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 ATP5C1P36542 298 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 MFAP3P55082 362 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 TNK2Q07912 1038 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 GRSF1Q12849 480 aaKnown RBP eCLIP16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 DPCR1Q3MIW9 517 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 ZC3H14Q6PJT7 736 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 CLDN23Q96B33 292 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 LMAN1LQ9HAT1 526 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 LRRC4Q9HBW1 653 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 SMPD4Q9NXE4 827 aa16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 MTF2Q9Y483 593 aaPredicted RBP16.63■□□□□ 0.25
TSPAN4-201ENST00000346501 TICRRQ7Z2Z1 1910 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 OLFM2O95897 454 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 SOX9P48436 509 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 KIF11P52732 1056 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 BST2Q10589 180 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 MAN2A1Q16706 1144 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 GOLGA7BQ2TAP0 167 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 TRIM68Q6AZZ1 485 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 RRAGAQ7L523 313 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 CCDC26Q8TAB7 109 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 RNF38Q9H0F5 515 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 ECT2Q9H8V3 914 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 CFAP97Q9P2B7 532 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 NAGPAQ9UK23 515 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 LSM7Q9UK45 103 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 TSPAN16Q9UKR8 245 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 WNT6Q9Y6F9 365 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 OBSL1O75147 1896 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 MIA3Q5JRA6 1907 aa16.62■□□□□ 0.25
TSPAN4-201ENST00000346501 F5P12259 2224 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 E2F8A0AVK6 867 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 GTPBP10A4D1E9 387 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 COCHO43405 550 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 ZDHHC11BP0C7U3 371 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 SETSIPP0DME0 302 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 KRT5P13647 590 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 PON2Q15165 354 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 EXOC3L4Q17RC7 722 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 SIX6OS1Q8N1H7 587 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 SYNPOQ8N3V7 929 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 RBBP8NLQ8NC74 664 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 ANKRD20A12PQ8NF67 263 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 OTUB2Q96DC9 234 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 CCSER2Q9H7U1 834 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 ANO10Q9NW15 660 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 TRIOO75962 3097 aa16.61■□□□□ 0.25
TSPAN4-201ENST00000346501 HHLA1C9JL84 531 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 MED7O43513 233 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 ARSAP15289 507 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 CCR3P51677 355 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 C10orf120Q5SQS8 335 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 CCDC183Q5T5S1 534 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 RSRC2Q7L4I2 434 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 PIGZQ86VD9 579 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms