RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PPARGP37231 505 aaPredicted RBP16.05■□□□□ 0.16
SRPK1-201ENST00000346162 SLC47A2Q86VL8 602 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 ARHGEF38Q9NXL2 777 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.05■□□□□ 0.163e-8■■□□□ 13.9
SRPK1-201ENST00000346162 ZBTB39O15060 712 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 PDGFRBP09619 1106 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 ITGADQ13349 1161 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 PARP6Q2NL67 630 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 CYP4A22Q5TCH4 519 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 C16orf89Q6UX73 402 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 SLC5A5Q92911 643 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 MKL1Q969V6 931 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 RSAD1Q9HA92 442 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 XPO7Q9UIA9 1087 aaKnown RBP16.05■□□□□ 0.16
SRPK1-201ENST00000346162 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 MRC1P22897 1456 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 GSTA4O15217 222 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 PJA2O43164 708 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 SKIV2L2P42285 1042 aaKnown RBP16.05■□□□□ 0.16
SRPK1-201ENST00000346162 CERS5Q8N5B7 392 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 CKAP2Q8WWK9 683 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 ZC3H7BQ9UGR2 993 aaKnown RBP16.05■□□□□ 0.16
SRPK1-201ENST00000346162 TAGLN3Q9UI15 199 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 ANGPTL3Q9Y5C1 460 aa16.05■□□□□ 0.16
SRPK1-201ENST00000346162 MROH7Q68CQ1 1323 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 AP3B1O00203 1094 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 GAS2O43903 313 aaKnown RBP16.04■□□□□ 0.16
SRPK1-201ENST00000346162 CDH3P22223 829 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 CYP24A1Q07973 514 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 NBPF12Q5TAG4 269 aaPredicted RBP16.04■□□□□ 0.16
SRPK1-201ENST00000346162 ITPRIPL1Q6GPH6 555 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 C3orf62Q6ZUJ4 267 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 FAM111AQ96PZ2 611 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 DDX3XO00571 662 aaKnown RBP eCLIP16.04■□□□□ 0.164e-24■■□□□ 11.6
SRPK1-201ENST00000346162 RARBP10826 455 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 CDC42EP1Q00587 391 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 LRRC55Q6ZSA7 311 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 TMEM110Q86TL2 294 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 KCNMB3Q9NPA1 279 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 CTNNAL1Q9UBT7 734 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 WDR37Q9Y2I8 494 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 S100A5P33763 92 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 TMEM62Q0P6H9 643 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 UBA3Q8TBC4 463 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 DNAJC19Q96DA6 116 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 HPDLQ96IR7 371 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 LRMDAQ9H2I8 198 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
SRPK1-201ENST00000346162 ALOX15P16050 662 aaPredicted RBP16.03■□□□□ 0.16
SRPK1-201ENST00000346162 PDK3Q15120 406 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 RGS21Q2M5E4 152 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 RSBN1Q5VWQ0 802 aaPredicted RBP16.03■□□□□ 0.16
SRPK1-201ENST00000346162 WDR59Q6PJI9 974 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 FCHO1O14526 889 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 BCL10O95999 233 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 LYNP07948 512 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 PAX3P23760 479 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 CCNFP41002 786 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 CCR3P51677 355 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 KCNA1Q09470 495 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 KIF19Q2TAC6 998 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 HORMAD1Q86X24 394 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■■■■■ 30.6
SRPK1-201ENST00000346162 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
SRPK1-201ENST00000346162 PPP1R36Q96LQ0 422 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 MTMR12Q9C0I1 747 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 FAM198AQ9UFP1 575 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 AK5Q9Y6K8 562 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 SLIT3O75094 1523 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 MAPTP10636 758 aaKnown RBP16.03■□□□□ 0.16
SRPK1-201ENST00000346162 SOX10P56693 466 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 SNAPC2Q13487 334 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 ANO4Q32M45 955 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 CCNYL1Q8N7R7 359 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 APPL2Q8NEU8 664 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 ARMCX1Q9P291 453 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 ABT1Q9ULW3 272 aaKnown RBP16.03■□□□□ 0.16
SRPK1-201ENST00000346162 RCCD1A6NED2 376 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 CFAP99D6REC4 459 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 TAC1P20366 129 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 CASP5P51878 434 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 PGM5Q15124 567 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 ANKRD13AQ8IZ07 590 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 PYDC1Q8WXC3 89 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 EXT2Q93063 718 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 ECSITQ9BQ95 431 aa16.03■□□□□ 0.16
SRPK1-201ENST00000346162 RBMX2Q9Y388 322 aaKnown RBP16.03■□□□□ 0.16
SRPK1-201ENST00000346162 NEMP1O14524 444 aa16.02■□□□□ 0.16
SRPK1-201ENST00000346162 MEIS2O14770 477 aa16.02■□□□□ 0.16
SRPK1-201ENST00000346162 EPHB6O15197 1021 aa16.02■□□□□ 0.16
SRPK1-201ENST00000346162 PSTPIP1O43586 416 aa16.02■□□□□ 0.16
SRPK1-201ENST00000346162 ASNA1O43681 348 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms