RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 NDUFA5Q16718 116 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 FBXW8Q8N3Y1 598 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 C19orf18Q8NEA5 215 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 USP33Q8TEY7 942 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 DLG3Q92796 817 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 WRNIP1Q96S55 665 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RERGLQ9H628 205 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 MINPP1Q9UNW1 487 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RUVBL2Q9Y230 463 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 TYW5A2RUC4 315 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 TBX3O15119 743 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 PARNO95453 639 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 C4BPBP20851 252 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 XPAP23025 273 aaPredicted RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 KCNT1Q5JUK3 1230 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SPOCD1Q6ZMY3 1216 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 APBB2Q92870 758 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 MRPL4Q9BYD3 311 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SIK2Q9H0K1 926 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 NDFIP2Q9NV92 336 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 KCND2Q9NZV8 630 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ACTL7BQ9Y614 415 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ATP8B3O60423 1300 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 C15orf38-AP3S2A0A0A6YYH1 394 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 PTGES3LE9PB15 166 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 KIAA0391O15091 583 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 STX7O15400 261 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 CYTH3O43739 400 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SUPT7LO94864 414 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 PROSCO94903 275 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 LTKP29376 864 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 TROAPQ12815 778 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ATG14Q6ZNE5 492 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ARPINQ7Z6K5 226 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ROGDIQ9GZN7 287 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 AFF4Q9UHB7 1163 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 CNOT3O75175 753 aaKnown RBP12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ELK3P41970 407 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 RAD23AP54725 363 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 TRAF3Q13114 568 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 FAM83EQ2M2I3 478 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SPANXN2Q5MJ10 180 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 ULK2Q8IYT8 1036 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 DNAJC18Q9H819 358 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 PCDH9Q9HC56 1237 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SFMBT1Q9UHJ3 866 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 AP4B1Q9Y6B7 739 aa12.5□□□□□ -0.41
COL12A1-202ENST00000345356 SPDYE5A6NIY4 337 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 AKAP3O75969 853 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 TGM2P21980 687 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 PTPN7P35236 360 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 PTGER2P43116 358 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 NAA20P61599 178 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 C9orf16Q9BUW7 83 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 SPATA2Q9UM82 520 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
COL12A1-202ENST00000345356 ROBO2Q9HCK4 1378 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 UMODL1Q5DID0 1318 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 MAP3K6O95382 1288 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
COL12A1-202ENST00000345356 SULT1E1P49888 294 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 PTK6Q13882 451 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 GPR107Q5VW38 600 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 TTC7BQ86TV6 843 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 TTC39CQ8N584 583 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 DAGLBQ8NCG7 672 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 UBDO15205 165 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 INPP4BO15327 924 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 TNFRSF21O75509 655 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 CCT3P49368 545 aaKnown RBP12.49□□□□□ -0.41
COL12A1-202ENST00000345356 CASP5P51878 434 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 IL31Q6EBC2 164 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 AADACL2Q6P093 401 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 CCDC33Q8N5R6 958 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 POLR1BQ9H9Y6 1135 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 SP110Q9HB58 689 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 CROTQ9UKG9 612 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 CHKBQ9Y259 395 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 PSMD3O43242 534 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 GPD1P21695 349 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 CDK7P50613 346 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 DENND5BQ6ZUT9 1274 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 OSCP1Q8WVF1 389 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 KCTD14Q9BQ13 255 aaPredicted RBP12.49□□□□□ -0.41
COL12A1-202ENST00000345356 BDH2Q9BUT1 245 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 SALL1Q9NSC2 1324 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 PNMA8CA0A1B0GUJ8 204 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 GOLGA8TH3BQL2 631 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 LDLRP01130 860 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 CCR3P51677 355 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 DSTYKQ6XUX3 929 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 NOP9Q86U38 636 aaKnown RBP12.49□□□□□ -0.41
COL12A1-202ENST00000345356 ZCCHC9Q8N567 271 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms