RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 TAF6P49848 677 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 EPHX4Q8IUS5 362 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 GPRASP2Q96D09 838 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 ANAPC2Q9UJX6 822 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 RRN3P2A6NIE6 340 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 IFRD1O00458 451 aaPredicted RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 ZNF682O95780 498 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 ST13P5Q8NFI4 369 aaPredicted RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 CYFIP2Q96F07 1278 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 NT5MQ9NPB1 228 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 STAP2Q9UGK3 403 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 LNPEPQ9UIQ6 1025 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 TTC26A0AVF1 554 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 TBC1D3BA6NDS4 549 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 MGAT4DA6NG13 374 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 C16orf96A6NNT2 1141 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 MAGEB2O15479 319 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 DGAT1O75907 488 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 ADORA2AP29274 412 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 AP3M2P53677 418 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 LRRC74BQ6ZQY2 392 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 PRPF39Q86UA1 669 aaKnown RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 FAM151AQ8WW52 585 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 STK33Q9BYT3 514 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 GOLPH3Q9H4A6 298 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 AKAP7Q9P0M2 348 aaPredicted RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 APEX2Q9UBZ4 518 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 SKIV2L2P42285 1042 aaKnown RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 PTGER2P43116 358 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 KYNUQ16719 465 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 KCNT1Q5JUK3 1230 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 SNX30Q5VWJ9 437 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 TIGD7Q6NT04 549 aaPredicted RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 ENOSF1Q7L5Y1 443 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 PIH1D1Q9NWS0 290 aaKnown RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 KLHL20Q9Y2M5 609 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 GMNCA6NCL1 334 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 SUPT7LO94864 414 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 PGK1P00558 417 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 VAC14Q08AM6 782 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 MTF1Q14872 753 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 PCYOX1LQ8NBM8 494 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 SEMA4DQ92854 862 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 ELL3Q9HB65 397 aaPredicted RBP12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 GPATCH2LQ9NWQ4 482 aa12.65□□□□□ -0.38
TRIOBP-202ENST00000344404 OR6A2O95222 327 aa12.65□□□□□ -0.39
TRIOBP-202ENST00000344404 THP07101 528 aa12.65□□□□□ -0.39
TRIOBP-202ENST00000344404 RHOCP08134 193 aa12.65□□□□□ -0.39
TRIOBP-202ENST00000344404 USP11P51784 963 aa12.65□□□□□ -0.39
TRIOBP-202ENST00000344404 LCMT1Q9UIC8 334 aa12.65□□□□□ -0.39
TRIOBP-202ENST00000344404 ADGRL2O95490 1459 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 PRKAA1Q13131 559 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 CCNIQ14094 377 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 CHI3L2Q15782 390 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 C12orf60Q5U649 245 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 PLPP4Q5VZY2 271 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 DENND6AQ8IWF6 608 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 OR2W6PQ8NHA6 318 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 EDEM1Q92611 657 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 GLMNQ92990 594 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 S100A13Q99584 98 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 PHACTR1Q9C0D0 580 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 VPS26AO75436 327 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 C16orf89Q6UX73 402 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 ZSWIM2Q8NEG5 633 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 MIEF1Q9NQG6 463 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 NPC1L1Q9UHC9 1359 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 ACSL4O60488 711 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 USP1O94782 785 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 IL18RAPO95256 599 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 RPN2P04844 631 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TFE3P19532 575 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 KCNJ1P48048 391 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 RHOAP61586 193 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 UGT3A1Q6NUS8 523 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 PTAR1Q7Z6K3 402 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TNIP2Q8NFZ5 429 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 DEFB118Q96PH6 123 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 NCKAP1Q9Y2A7 1128 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 AP3D1O14617 1153 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 TBX3O15119 743 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 KLRC1P26715 233 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 PIGHQ14442 188 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 COL26A1Q96A83 441 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 KCNQ5Q9NR82 932 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 SH3BP4Q9P0V3 963 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 CAMSAP1Q5T5Y3 1602 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 CST8O60676 142 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 MT-CO1P00395 513 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 OXCT1P55809 520 aa12.64□□□□□ -0.39
TRIOBP-202ENST00000344404 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms