RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 KIZQ2M2Z5 673 aa22.35■■□□□ 1.17
CCDC38-201ENST00000344280 RNF43Q68DV7 783 aa22.35■■□□□ 1.17
CCDC38-201ENST00000344280 LVRNQ6Q4G3 990 aa22.35■■□□□ 1.17
CCDC38-201ENST00000344280 SCUBE3Q8IX30 993 aa22.35■■□□□ 1.17
CCDC38-201ENST00000344280 AGGF1Q8N302 714 aaeCLIP22.35■■□□□ 1.17
CCDC38-201ENST00000344280 DCAKDQ8WVC6 231 aa22.35■■□□□ 1.17
CCDC38-201ENST00000344280 B3GNT5Q9BYG0 378 aa22.35■■□□□ 1.17
CCDC38-201ENST00000344280 KATNBL1Q9H079 304 aa22.35■■□□□ 1.17
CCDC38-201ENST00000344280 IGF2BP3O00425 579 aaKnown RBP eCLIP22.34■■□□□ 1.17
CCDC38-201ENST00000344280 PRPSAP2O60256 369 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 CA9Q16790 459 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 OLFML1Q6UWY5 402 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 SHCBP1Q8NEM2 672 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 KHSRPQ92945 711 aaKnown RBP eCLIP22.34■■□□□ 1.17
CCDC38-201ENST00000344280 RNF157Q96PX1 679 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 PHACTR1Q9C0D0 580 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 NGRNQ9NPE2 291 aaKnown RBP22.34■■□□□ 1.17
CCDC38-201ENST00000344280 HES2Q9Y543 173 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 SNX9Q9Y5X1 595 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 ATP6V1G2O95670 118 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 NQO1P15559 274 aaKnown RBP22.34■■□□□ 1.17
CCDC38-201ENST00000344280 TFE3P19532 575 aaPredicted RBP22.34■■□□□ 1.17
CCDC38-201ENST00000344280 RNASELQ05823 741 aaKnown RBP22.34■■□□□ 1.17
CCDC38-201ENST00000344280 ACVR2BQ13705 512 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 PLD5Q8N7P1 536 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 USP29Q9HBJ7 922 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 STARD13Q9Y3M8 1113 aa22.34■■□□□ 1.17
CCDC38-201ENST00000344280 H7C0C1 242 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 SNAI1O95863 264 aaPredicted RBP22.33■■□□□ 1.17
CCDC38-201ENST00000344280 ADRA1DP25100 572 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 ATP5OP48047 213 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 GRIK4Q16099 956 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 PKDCCQ504Y2 493 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 RGS9BPQ6ZS82 235 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 PQLC3Q8N755 202 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 GBP7Q8N8V2 638 aaPredicted RBP22.33■■□□□ 1.17
CCDC38-201ENST00000344280 GRAMD1AQ96CP6 724 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 PPCSQ9HAB8 311 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.33■■□□□ 1.17
CCDC38-201ENST00000344280 SNTG2Q9NY99 539 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 TUBGCP4Q9UGJ1 667 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 BAIAP2L1Q9UHR4 511 aa22.33■■□□□ 1.17
CCDC38-201ENST00000344280 PLXNA1Q9UIW2 1896 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 NPTXRO95502 500 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 KRT81Q14533 505 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 KCNJ11Q14654 390 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 GLRA4Q5JXX5 417 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 FAXCQ5TGI0 409 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 GPRC5AQ8NFJ5 357 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 FAM172AQ8WUF8 416 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 PLCD4Q9BRC7 762 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 FETUBQ9UGM5 382 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 GJD2Q9UKL4 321 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 HEY1Q9Y5J3 304 aa22.33■■□□□ 1.16
CCDC38-201ENST00000344280 LOC102724159A0A0B4J2E5 919 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 WDR91A4D1P6 747 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 CFAP73A6NFT4 308 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 EDF1O60869 148 aaKnown RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 HOXA11P31270 313 aaPredicted RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 STIP1P31948 543 aaKnown RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 MSH2P43246 934 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 PWP2Q15269 919 aaKnown RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 HHATQ5VTY9 493 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 LRRC8CQ8TDW0 803 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 C18orf25Q96B23 403 aaPredicted RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 KLHL29Q96CT2 875 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 EIF2AQ9BY44 585 aaKnown RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 MAGEB5Q9BZ81 275 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 MYLK2Q9H1R3 596 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 NOD2Q9HC29 1040 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 VTA1Q9NP79 307 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 SLC17A7Q9P2U7 560 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 TCRBV9S1A1TA0A576 114 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 KBTBD13C9JR72 458 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 STAU1O95793 577 aaKnown RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 KRT16P08779 473 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 SNAPC2Q13487 334 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 KLHL38Q2WGJ6 581 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 CCDC125Q86Z20 511 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 PCDH19Q8TAB3 1148 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.32■■□□□ 1.16
CCDC38-201ENST00000344280 TCP10LQ8TDR4 215 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 CDHR5Q9HBB8 845 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 CHKBQ9Y259 395 aa22.32■■□□□ 1.16
CCDC38-201ENST00000344280 KCNN4O15554 427 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 PAPSS1O43252 624 aaPredicted RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 SMPD1P17405 629 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 GRM5P41594 1212 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 ASRGL1Q7L266 308 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 CEP57Q86XR8 500 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 ZNF276Q8N554 614 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 CLEC4CQ8WTT0 213 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 ZNF75CPQ92670 426 aaPredicted RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 EMID1Q96A84 441 aaPredicted RBP22.31■■□□□ 1.16
CCDC38-201ENST00000344280 FAF2Q96CS3 445 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 MIS12Q9H081 205 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 DPEP3Q9H4B8 488 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 PCDH18Q9HCL0 1135 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 RAB6BQ9NRW1 208 aa22.31■■□□□ 1.16
CCDC38-201ENST00000344280 SETD4Q9NVD3 440 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms