RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 TRIM10Q9UDY6 481 aa17.18■□□□□ 0.34
SNED1-202ENST00000342631 MTCL1Q9Y4B5 1905 aaKnown RBP17.18■□□□□ 0.34
SNED1-202ENST00000342631 FAM92AA1XBS5 289 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 MACROD2A1Z1Q3 448 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 NAP1L1P55209 391 aaKnown RBP17.17■□□□□ 0.34
SNED1-202ENST00000342631 DAOAP59103 153 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 DCUN1D2Q6PH85 259 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 TRIM58Q8NG06 486 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 FNIP1Q8TF40 1166 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 MRPL38Q96DV4 380 aaKnown RBP17.17■□□□□ 0.34
SNED1-202ENST00000342631 ALS2CR12Q96Q35 445 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 CDCA3Q99618 268 aaPredicted RBP17.17■□□□□ 0.34
SNED1-202ENST00000342631 YIPF1Q9Y548 306 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 ASB3Q9Y575 518 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
SNED1-202ENST00000342631 FAM170AA1A519 330 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 GOLGA8SH3BPF8 625 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 KIF2AO00139 706 aaPredicted RBP17.17■□□□□ 0.34
SNED1-202ENST00000342631 ZNF500O60304 480 aaPredicted RBP17.17■□□□□ 0.34
SNED1-202ENST00000342631 HSF2BPO75031 334 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 ABL1P00519 1130 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 CSH1P0DML2 217 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 CSH2P0DML3 217 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 VEPH1Q14D04 833 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 GPRIN1Q7Z2K8 1008 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 C17orf53Q8N3J3 647 aaPredicted RBP17.17■□□□□ 0.34
SNED1-202ENST00000342631 KREMEN2Q8NCW0 462 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 GDPD5Q8WTR4 605 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 TTLL2Q9BWV7 592 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 ULBP1Q9BZM6 244 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 ZNF576Q9H609 170 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 OSGEPQ9NPF4 335 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 SALL4Q9UJQ4 1053 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 TMEM59LQ9UK28 342 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 SCML2Q9UQR0 700 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 PCDHGC5Q9Y5F6 944 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 INSL5Q9Y5Q6 135 aa17.17■□□□□ 0.34
SNED1-202ENST00000342631 LAMA2P24043 3122 aaKnown RBP17.16■□□□□ 0.34
SNED1-202ENST00000342631 GREB1Q4ZG55 1949 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 TMEM191CA6NGB0 347 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 MYO1FO00160 1098 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 PIK3R2O00459 728 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 CLASP2O75122 1294 aaKnown RBP17.16■□□□□ 0.34
SNED1-202ENST00000342631 ATF6P18850 670 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 EPHB3P54753 998 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 BEND5Q7L4P6 421 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 ITIH5Q86UX2 942 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 SYCE1Q8N0S2 351 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 ARHGAP18Q8N392 663 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 TPCN2Q8NHX9 752 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 GOLGA1Q92805 767 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 LMCD1Q9NZU5 365 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 COG5Q9UP83 839 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
SNED1-202ENST00000342631 CHD9Q3L8U1 2897 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 PLXNA3P51805 1871 aa17.16■□□□□ 0.34
SNED1-202ENST00000342631 YWHAQP27348 245 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 GPR15P49685 360 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
SNED1-202ENST00000342631 C11orf63Q6NUN7 778 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 SCAMP5Q8TAC9 235 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 OVCA2Q8WZ82 227 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 TRMT2BQ96GJ1 504 aaKnown RBP17.15■□□□□ 0.34
SNED1-202ENST00000342631 MCEEQ96PE7 176 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 METTL5Q9NRN9 209 aaKnown RBP17.15■□□□□ 0.34
SNED1-202ENST00000342631 IP6K2Q9UHH9 426 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 ANAPC7Q9UJX3 599 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 PAXBP1Q9Y5B6 917 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 COL4A4P53420 1690 aaPredicted RBP17.15■□□□□ 0.34
SNED1-202ENST00000342631 EPOPA6NHQ4 379 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 SLC38A8A6NNN8 435 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 BUB1O43683 1085 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 USP17L7P0C7H9 530 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 DESP17661 470 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 HOXA9P31269 272 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 PSEN1P49768 467 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 ACAP1Q15027 740 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 PRPF38BQ5VTL8 546 aaKnown RBP17.15■□□□□ 0.34
SNED1-202ENST00000342631 LLGL2Q6P1M3 1020 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 NYAP1Q6ZVC0 841 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 PHLDB2Q86SQ0 1253 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 MON1AQ86VX9 555 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 SLC22A17Q8WUG5 538 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 KHSRPQ92945 711 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNED1-202ENST00000342631 MYRFLQ96LU7 910 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 TLE6Q9H808 572 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 POPDC2Q9HBU9 364 aa17.15■□□□□ 0.34
SNED1-202ENST00000342631 UXTQ9UBK9 157 aaPredicted RBP17.15■□□□□ 0.34
SNED1-202ENST00000342631 SOAT2O75908 522 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 MOCS3O95396 460 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 LRG1P02750 347 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 C8AP07357 584 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 RFC1P35251 1148 aaPredicted RBP17.14■□□□□ 0.33
SNED1-202ENST00000342631 RPL7AP62424 266 aaKnown RBP17.14■□□□□ 0.33
SNED1-202ENST00000342631 TWF1Q12792 350 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 PIGHQ14442 188 aaPredicted RBP17.14■□□□□ 0.33
SNED1-202ENST00000342631 TAF12Q16514 161 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 SDHAF4Q5VUM1 108 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 SLC7A14Q8TBB6 771 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms