RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 EME1Q96AY2 570 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 FAM136AQ96C01 138 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 FAM167AQ96KS9 214 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 C2orf40Q9H1Z8 148 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 KCNK1O00180 336 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 DCXO43602 365 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 USP1O94782 785 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 ACADSP16219 412 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 DPEP1P16444 411 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 ADSSP30520 456 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 PTPN11Q06124 597 aaPredicted RBP12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 BST1Q10588 318 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 USP10Q14694 798 aaKnown RBP12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 LY6KQ17RY6 165 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 RNF220Q5VTB9 566 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 ANKRD22Q5VYY1 191 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 MFSD5Q6N075 450 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 TTC7BQ86TV6 843 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 MAN1C1Q9NR34 630 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 C2CD2Q9Y426 696 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 SPEF2Q9C093 1822 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 KDM4FA0A1W2PPD8 638 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 HUS1O60921 280 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 NAMPTP43490 491 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 ESRRGP62508 458 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 ZACNQ401N2 412 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 ANKRD20A4Q4UJ75 823 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 GPRASP2Q96D09 838 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 DMAC2Q9NW81 257 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 ZNF711Q9Y462 761 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 C5orf60A6NFR6 353 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 CYB561D2O14569 222 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 PAEPP09466 180 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 RARBP10826 455 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 AP3M2P53677 418 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 SATB1Q01826 763 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 KHDC1Q4VXA5 237 aaKnown RBP12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 SLC45A4Q5BKX6 768 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 LRRC8EQ6NSJ5 796 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 CLNKQ7Z7G1 428 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 APPL1Q9UKG1 709 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
SNRNP48-201ENST00000342415 A0A0B4J269 797 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 ZBBXA8MT70 800 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 VTNP04004 478 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 HMGCRP04035 888 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 CD48P09326 243 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 SULT1E1P49888 294 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 CDK16Q00536 496 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 TXNRD3NBQ6F5E7 133 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 HIC2Q96JB3 615 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 RHBDL2Q9NX52 303 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 LRCH1Q9Y2L9 728 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 V9GYQ6 96 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 DFFAO00273 331 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 TM9SF1O15321 606 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 PSMG1O95456 288 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 KDELR1P24390 212 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 GAD2Q05329 585 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 UBAP2LQ14157 1087 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 SLC15A2Q16348 729 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 RARS2Q5T160 578 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 DSTYKQ6XUX3 929 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 FSD1LQ9BXM9 530 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 CCDC68Q9H2F9 335 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 XAB2Q9HCS7 855 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 MAFGO15525 162 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 TPH1P17752 444 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 MLH1P40692 756 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 ZNF268Q14587 947 aaPredicted RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 WASHC2DQ5SRD0 308 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 RFWD3Q6PCD5 774 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 C15orf52Q6ZUT6 534 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 CMTM5Q96DZ9 223 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 EFHD1Q9BUP0 239 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 RIPK3Q9Y572 518 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 ATXN2Q99700 1313 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 DPPA5A6NC42 116 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 WNT10BO00744 389 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 MAPTP10636 758 aaKnown RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 ARPP19P56211 112 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 RBP5P82980 135 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 CXCL9Q07325 125 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 FLOT2Q14254 428 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 EFHC2Q5JST6 749 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 ARMCX2Q7L311 632 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 TMPRSS6Q8IU80 811 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms