RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ARL2P36404 184 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 APLP1P51693 650 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 FSCN1Q16658 493 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ZBTB41Q5SVQ8 909 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 LRIG3Q6UXM1 1119 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 IFNEQ86WN2 208 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ICA1LQ8NDH6 482 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 GANQ9H2C0 597 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 GPATCH2LQ9NWQ4 482 aa10.9□□□□□ -0.66
CAPRIN1-201ENST00000341394 ASAP2O43150 1006 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 ATP9BO43861 1147 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 CREB3O43889 395 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 RTN2O75298 545 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 ENO3P13929 434 aaPredicted RBP10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 MAPK10P53779 464 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 RTP1P59025 263 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 TARBP2Q15633 366 aaKnown RBP10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 KIZQ2M2Z5 673 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 ZSWIM1Q9BR11 485 aa10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 RBAKQ9NYW8 714 aaPredicted RBP10.9□□□□□ -0.67
CAPRIN1-201ENST00000341394 GOLGA8QA0A0J9YX86 632 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 GOLGA8OA6NCC3 632 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 GOLGA8NF8WBI6 632 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 HSPA4LO95757 839 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 LDHAP00338 332 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 HNRNPCP07910 306 aaKnown RBP eCLIP10.89□□□□□ -0.676e-7■□□□□ 9.2
CAPRIN1-201ENST00000341394 CCND1P24385 295 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 PPP3CAQ08209 521 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 SEPT6Q14141 434 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 WDR72Q3MJ13 1102 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 HGSNATQ68CP4 663 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 CATSPER4Q7RTX7 472 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 BBOF1Q8ND07 529 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 CD99L2Q8TCZ2 262 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 NTPCRQ9BSD7 190 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 GDF3Q9NR23 364 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 DDX18Q9NVP1 670 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 AK5Q9Y6K8 562 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 PEX1O43933 1283 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 PRPSAP2O60256 369 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 ZMPSTE24O75844 475 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 PDE5AO76074 875 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 TNNC2P02585 160 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 SNRPFP62306 86 aaKnown RBP10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 ARHGEF6Q15052 776 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 FAM102AQ5T9C2 384 aaPredicted RBP10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 RHOT1Q8IXI2 618 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 ADPGKQ9BRR6 497 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 WNT8AQ9H1J5 351 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 MYLK2Q9H1R3 596 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 SUDS3Q9H7L9 328 aaPredicted RBP10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 IL1RL2Q9HB29 575 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 KIAA1586Q9HCI6 787 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 DONSONQ9NYP3 566 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 RRN3P2A6NIE6 340 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 A6NJR5 290 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 RIPK2O43353 540 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 TMEM253P0C7T8 217 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 BGNP21810 368 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 GNL1P36915 607 aaPredicted RBP10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 ART3Q13508 389 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 MFSD10Q14728 455 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 UBA3Q8TBC4 463 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 HDAC11Q96DB2 347 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 MTBPQ96DY7 904 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 RPS6KC1Q96S38 1066 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 MED10Q9BTT4 135 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 ST6GALNAC4Q9H4F1 302 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 PTPRHQ9HD43 1115 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 ARHGAP28Q9P2N2 729 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 C15orf41Q9Y2V0 281 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 ADGRA2Q96PE1 1338 aa10.89□□□□□ -0.67
CAPRIN1-201ENST00000341394 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 M0QZ92 97 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 ADRA1DP25100 572 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 PLIN5Q00G26 463 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 CXCL17Q6UXB2 119 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 C4orf50Q6ZRC1 276 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 LRRC6Q86X45 466 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 CCHCR1Q8TD31 782 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 TMA16Q96EY4 203 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 LRGUKQ96M69 825 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 ARHGAP26Q9UNA1 814 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 KNL1Q8NG31 2342 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 KCNN4O15554 427 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 SERPINB3P29508 390 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 EIF3EP60228 445 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 MYBPC2Q14324 1141 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 ATF7IP2Q5U623 682 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 PRPF39Q86UA1 669 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 ZNF784Q8NCA9 323 aaPredicted RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 C1orf131Q8NDD1 294 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 APOBEC2Q9Y235 224 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 EXTL3O43909 919 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 MYL2P10916 166 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 GARTP22102 1010 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 POLR2BP30876 1174 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 PSEN2P49810 448 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 CCNHP51946 323 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms