RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 ASGR1P07306 291 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 HMOX2P30519 316 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 PTK6Q13882 451 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 AGR3Q8TD06 166 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 MRPL1Q9BYD6 325 aaKnown RBP13.33□□□□□ -0.28
DNMT1-201ENST00000340748 TLE6Q9H808 572 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 DSEQ9UL01 958 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 SNCAIPQ9Y6H5 919 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
DNMT1-201ENST00000340748 NIPA1Q7RTP0 329 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 KDELC2Q7Z4H8 507 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 SETD3Q86TU7 594 aaPredicted RBP13.33□□□□□ -0.28
DNMT1-201ENST00000340748 PALB2Q86YC2 1186 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 STAMBPL1Q96FJ0 436 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 AFF4Q9UHB7 1163 aaKnown RBP13.33□□□□□ -0.28
DNMT1-201ENST00000340748 IRS2Q9Y4H2 1338 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 A0A0G2JLL6 359 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PRR23AA6NEV1 266 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ASMTLO95671 621 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 SELPP16109 830 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ATICP31939 592 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ZNF697Q5TEC3 545 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 C11orf63Q6NUN7 778 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PRRT2Q7Z6L0 340 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-201ENST00000340748 RAB42Q8N4Z0 105 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 E2F7Q96AV8 911 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 OSBPL1AQ9BXW6 950 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 KCPQ6ZWJ8 1503 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 TFDP3Q5H9I0 405 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PABPC5Q96DU9 382 aaKnown RBP13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PORCNQ9H237 461 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 TRAF3IP3Q9Y228 551 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 CHD2O14647 1828 aaKnown RBP13.32□□□□□ -0.28
DNMT1-201ENST00000340748 AKAP3O75969 853 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ANXA9O76027 345 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 APOA4P06727 396 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 HIST1H2AGP0C0S8 130 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-201ENST00000340748 SLURP2P0DP57 97 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 HIST1H2ADP20671 130 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PTGER2P43116 358 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ZNF571Q7Z3V5 609 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ERP27Q96DN0 273 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PAWRQ96IZ0 340 aaKnown RBP13.32□□□□□ -0.28
DNMT1-201ENST00000340748 HIST1H2AHQ96KK5 128 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 HIST1H2AJQ99878 128 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 H2AFJQ9BTM1 129 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ATXN3LQ9H3M9 355 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 NFAT5O94916 1531 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ZNF263O14978 683 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PYGLP06737 847 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 SLC2A3P11169 496 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 NCAM1P13591 858 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 LAMTOR4Q0VGL1 99 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ZBTB17Q13105 803 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 CASS4Q9NQ75 786 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 PCDHGB4Q9UN71 923 aa13.32□□□□□ -0.28
DNMT1-201ENST00000340748 CYB561D2O14569 222 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 RNASEH1O60930 286 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 RTP1P59025 263 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 PSRC1Q6PGN9 363 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 EFL1Q7Z2Z2 1120 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 VGLL2Q8N8G2 317 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 PACSIN1Q9BY11 444 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 CYP3A43Q9HB55 503 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 WARS2Q9UGM6 360 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 SLC30A1Q9Y6M5 507 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 PARP4Q9UKK3 1724 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 MOXD2PA6NHM9 499 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 CES2O00748 559 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 ACRP10323 421 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 RARGP13631 454 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 CCND1P24385 295 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 AMHR2Q16671 573 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 CLEC16AQ2KHT3 1053 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 IL31Q6EBC2 164 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 BTNL9Q6UXG8 535 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 KIAA0895Q8NCT3 520 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 EXD1Q8NHP7 514 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 SH3KBP1Q96B97 665 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 TMBIM4Q9HC24 238 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 UBA1P22314 1058 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 DYNC1I2Q13409 638 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 DUSP10Q9Y6W6 482 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 DUSP11O75319 330 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 PROSCO94903 275 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 PPM1AP35813 382 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 TMEM259Q4ZIN3 620 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 SZRD1Q7Z422 152 aa13.31□□□□□ -0.28
DNMT1-201ENST00000340748 ADAM33Q9BZ11 813 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms