RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 UPP1Q16831 310 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 INAVAQ3KP66 663 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 ZSCAN23Q3MJ62 389 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 ATP2A3Q93084 1043 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 PGLYRP2Q96PD5 576 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 SLC30A3Q99726 388 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 ANO3Q9BYT9 981 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 KIF9Q9HAQ2 790 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 DISC1Q9NRI5 854 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 TDP1Q9NUW8 608 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 TBX3O15119 743 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 B4GALT5O43286 388 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 SOAT2O75908 522 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 CPB1P15086 417 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 AVPR1AP37288 418 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 CD97P48960 835 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 DUSP4Q13115 394 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
ATXN3-201ENST00000340660 EFCAB13Q8IY85 973 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 MAB21L3Q8N8X9 362 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 RNF149Q8NC42 400 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 TMEM143Q96AN5 459 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 MMS19Q96T76 1030 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 SPZ1Q9BXG8 430 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 GOLGA2P5Q9HBQ8 144 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 CD248Q9HCU0 757 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 THSD1Q9NS62 852 aa12.19□□□□□ -0.46
ATXN3-201ENST00000340660 GEMIN8Q9NWZ8 242 aaKnown RBP12.19□□□□□ -0.46
ATXN3-201ENST00000340660 ELOA3CA0A087WX78 387 aaPredicted RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 A0A0D9SFI3 127 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 ELOA3DA6NLF2 546 aaPredicted RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 PAPSS1O43252 624 aaPredicted RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 SIN3BO75182 1162 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 CLDN1O95832 211 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 MT-CO3P00414 261 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 NCAM1P13591 858 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 LSSP48449 732 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 CDR1P51861 262 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 CLCA4Q14CN2 919 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 TBR1Q16650 682 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 ELOA3BQ3SY89 546 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 XKR3Q5GH77 459 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 DCAF12L1Q5VU92 463 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 SLC27A1Q6PCB7 646 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 MAMDC2Q7Z304 686 aaPredicted RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 GATAD2AQ86YP4 633 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 TTC9BQ8N6N2 239 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 ELOA3Q8NG57 546 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 IGSF8Q969P0 613 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 ERLEC1Q96DZ1 483 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 TRIM11Q96F44 468 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 YTHDC1Q96MU7 727 aaKnown RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 CCNL2Q96S94 520 aaPredicted RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 SLC6A17Q9H1V8 727 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 NOP53Q9NZM5 478 aaKnown RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 DKK3Q9UBP4 350 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 SEC63Q9UGP8 760 aaKnown RBP12.18□□□□□ -0.46
ATXN3-201ENST00000340660 ASB3Q9Y575 518 aa12.18□□□□□ -0.46
ATXN3-201ENST00000340660 A0A1W2PQF6 199 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 SYN3O14994 580 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 MARCH6O60337 910 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 OR4Q2P0C623 313 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 PRF1P14222 555 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 ALDH1A3P47895 512 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 UQCRFS1P47985 274 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 SLC6A11P48066 632 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 IFNAR2P48551 515 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 PCBP1Q15365 356 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATXN3-201ENST00000340660 ZNF77Q15935 545 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 KCNT1Q5JUK3 1230 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 LAYNQ6UX15 382 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 USP53Q70EK8 1073 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 CYB5R4Q7L1T6 521 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 TMEM150AQ86TG1 271 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 SGF29Q96ES7 293 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 MTMR9Q96QG7 549 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 LINC00597Q9H2U6 94 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 POLR1BQ9H9Y6 1135 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 EIF2B4Q9UI10 523 aaKnown RBP12.17□□□□□ -0.46
ATXN3-201ENST00000340660 ANKRD6Q9Y2G4 727 aa12.17□□□□□ -0.46
ATXN3-201ENST00000340660 LRRK1Q38SD2 2015 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 SEMA7AO75326 666 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 CD6P30203 668 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 CDC25CP30307 473 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 MBTD1Q05BQ5 628 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 TYRO3Q06418 890 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 FHL5Q5TD97 284 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 PLA2G4FQ68DD2 849 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 ZNF280DQ6N043 979 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 PSPC1Q8WXF1 523 aaKnown RBP12.16□□□□□ -0.46
ATXN3-201ENST00000340660 TMEM87BQ96K49 555 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 SUSD3Q96L08 255 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 C2orf49Q9BVC5 232 aaPredicted RBP12.16□□□□□ -0.46
ATXN3-201ENST00000340660 GPR174Q9BXC1 333 aa12.16□□□□□ -0.46
ATXN3-201ENST00000340660 BRD7Q9NPI1 651 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms