RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ADAM32Q8TC27 787 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 BLOC1S5Q8TDH9 187 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 RAB6BQ9NRW1 208 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 ARL5CA6NH57 179 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 TSPAN1O60635 241 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 CST8O60676 142 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 LYPLA2O95372 231 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 APODP05090 189 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 SF3A3Q12874 501 aaKnown RBP eCLIP13.32□□□□□ -0.28
LIN54-201ENST00000340417 UBXN2BQ14CS0 331 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 PLCL1Q15111 1095 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 CNPY3Q9BT09 278 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 SPATA16Q9BXB7 569 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 DERAQ9Y315 318 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 CAV1Q03135 178 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 PHACTR4Q8IZ21 702 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 SPATA17Q96L03 361 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 SLC13A4Q9UKG4 626 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 F8VP50 259 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 NPR3P17342 541 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SCNN1BP51168 640 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 GEMP55040 296 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 TIGD5Q53EQ6 642 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 DENND1CQ8IV53 801 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SLC9A7Q96T83 725 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 AASDHPPTQ9NRN7 309 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 ZNF212Q9UDV6 495 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SETD1AO15047 1707 aaKnown RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 ACSL3O95573 720 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 HADHAP40939 763 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 PHEXP78562 749 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SMAD3P84022 425 aaKnown RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 FBXL19Q6PCT2 694 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SLC39A5Q6ZMH5 540 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 VSIG1Q86XK7 387 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SCUBE3Q8IX30 993 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 GOLGA2P5Q9HBQ8 144 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 TRAF3IP3Q9Y228 551 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 CAPN2P17655 700 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 C9orf57Q5W0N0 161 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SLC47A2Q86VL8 602 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 TOP6BLQ8N6T0 577 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 PPM1NQ8N819 430 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 KREMEN2Q8NCW0 462 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 VAV3Q9UKW4 847 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 BAG5Q9UL15 447 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 SMIM28A0A1B0GU29 152 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 PBLDP30039 288 aaPredicted RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 MAPK9P45984 424 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 THOP1P52888 689 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 CCDC137Q6PK04 289 aaKnown RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 TMC5Q6UXY8 1006 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 POPDC2Q9HBU9 364 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 TMEM51Q9NW97 253 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 GOLGA8QA0A0J9YX86 632 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 GOLGA8OA6NCC3 632 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 GOLGA8NF8WBI6 632 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 TMEM253P0C7T8 217 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 CTSEP14091 401 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 FBXW4P57775 412 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 JAG1P78504 1218 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 NAPEPLDQ6IQ20 393 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 KIAA0895Q8NCT3 520 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.31□□□□□ -0.281e-7■■■■□ 24.9
LIN54-201ENST00000340417 ADGRE3Q9BY15 652 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.31□□□□□ -0.28
LIN54-201ENST00000340417 PYCARDQ9ULZ3 195 aa13.31□□□□□ -0.28
LIN54-201ENST00000340417 PLA2G4AP47712 749 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 DEFB106AQ8N104 65 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 EMC1Q8N766 993 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
LIN54-201ENST00000340417 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
LIN54-201ENST00000340417 C21orf59P57076 290 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 HP1BP3Q5SSJ5 553 aaPredicted RBP13.3□□□□□ -0.28
LIN54-201ENST00000340417 CST9Q5W186 159 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 AHCYL2Q96HN2 611 aaKnown RBP13.3□□□□□ -0.28
LIN54-201ENST00000340417 NT5MQ9NPB1 228 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 IL23AQ9NPF7 189 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 ARHGEF38Q9NXL2 777 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 AIPL1Q9NZN9 384 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 TUBGCP4Q9UGJ1 667 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 TMEM247A6NEH6 219 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 C1QTNF3-AMACRE9PGA6 284 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 CSF2RAP15509 400 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 NCKAP1LP55160 1127 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 PDK2Q15119 407 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 RBBP7Q16576 425 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 CENPPQ6IPU0 288 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 GAS2L3Q86XJ1 694 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 LRRC52Q8N7C0 313 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 ZNF606Q8WXB4 792 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 CCDC151A5D8V7 595 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 RASSF10A6NK89 507 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms