RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 CAPN7Q9Y6W3 813 aa11.2□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SUN1O94901 812 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CD48P09326 243 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ETS1P14921 441 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NR2C2P49116 596 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PDIA2Q13087 525 aaKnown RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GOLGA7BQ2TAP0 167 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PPP1R26Q5T8A7 1209 aaPredicted RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TRPM8Q7Z2W7 1104 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DPP9Q86TI2 863 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PDIK1LQ8N165 341 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MCUQ8NE86 351 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KAT2BQ92831 832 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZNF560Q96MR9 790 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 USP29Q9HBJ7 922 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CFAP73A6NFT4 308 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ANKRD65E5RJM6 399 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DNM1LO00429 736 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 VIMP08670 466 aaKnown RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CREB1P16220 341 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ATP2A2P16615 1042 aaKnown RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 BCAT1P54687 386 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PLCB3Q01970 1234 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 BST2Q10589 180 aaKnown RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SKIDA1Q1XH10 827 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SMTNL2Q2TAL5 461 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KCNT1Q5JUK3 1230 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 STRADAQ7RTN6 431 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 BNIPLQ7Z465 357 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PRUNE1Q86TP1 453 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZBED8Q8IZ13 594 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SPATA18Q8TC71 538 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MAGEC3Q8TD91 643 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DYDC1Q8WWB3 177 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZNF668Q96K58 619 aaPredicted RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZMAT2Q96NC0 199 aaKnown RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MAK16Q9BXY0 300 aaKnown RBP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HESX1Q9UBX0 185 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ARL2BPQ9Y2Y0 163 aa11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TM9SF1O15321 606 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZWINTO95229 277 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NPTXRO95502 500 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 IL1BP01584 269 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TAC1P20366 129 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SDC4P31431 198 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 STX2P32856 288 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SPARCL1Q14515 664 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FASTKD3Q14CZ7 662 aaKnown RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PDK4Q16654 411 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RNF187Q5TA31 235 aaPredicted RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SPRYD7Q5W111 196 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PMF1Q6P1K2 205 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CYS1Q717R9 158 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 UNC45BQ8IWX7 931 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PLD5Q8N7P1 536 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZNF398Q8TD17 642 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PYROXD1Q8WU10 500 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SMC6Q96SB8 1091 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 WDR83Q9BRX9 315 aaKnown RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PCDH18Q9HCL0 1135 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TEX264Q9Y6I9 313 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TCP11X1B4DZS4 312 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PAPSS1O43252 624 aaPredicted RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TMEM63AO94886 807 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 LRPAP1P30533 357 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MAGEA3P43357 314 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CDH6P55285 790 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 WDR4P57081 412 aaKnown RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SOWAHAQ2M3V2 549 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 OLFML2BQ68BL8 750 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 OR6B2Q6IFH4 312 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SRRM1Q8IYB3 904 aaKnown RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TOP6BLQ8N6T0 577 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PQLC3Q8N755 202 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 UBA3Q8TBC4 463 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ACSF2Q96CM8 615 aaPredicted RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HAUS1Q96CS2 278 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MRPL45Q9BRJ2 306 aaKnown RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TRABDQ9H4I3 376 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DNAJC17Q9NVM6 304 aaKnown RBP11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NME7Q9Y5B8 376 aa11.18□□□□□ -0.62
TRAF3IP2-201ENST00000340026 APOL1O14791 398 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 WARSP23381 471 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TMED2Q15363 201 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ANKRD22Q5VYY1 191 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CATSPER4Q7RTX7 472 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SPATA21Q7Z572 469 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NPLOC4Q8TAT6 608 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KBTBD7Q8WVZ9 684 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TGS1Q96RS0 853 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ELAC2Q9BQ52 826 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZNF180Q9UJW8 692 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms