RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 FAM71DQ8N9W8 422 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TTC13Q8NBP0 860 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CCDC197Q8NCU1 140 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ZNF296Q8WUU4 475 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KBTBD7Q8WVZ9 684 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CABS1Q96KC9 395 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TTC25Q96NG3 672 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 C11orf84Q9BUA3 381 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PHACTR1Q9C0D0 580 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FAM49BQ9NUQ9 324 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ASNSD1Q9NWL6 643 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 GPATCH2LQ9NWQ4 482 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TCP11X1B4DZS4 312 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RECQL4O94761 1208 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ATP5DP30049 168 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 EIF3EP60228 445 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PDIA2Q13087 525 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ITIH4Q14624 930 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TMED2Q15363 201 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PKN2Q16513 984 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ZC3H12AQ5D1E8 599 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 UBXN11Q5T124 520 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 C9orf57Q5W0N0 161 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 OLFML2BQ68BL8 750 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CEP128Q6ZU80 1094 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ANKMY2Q8IV38 441 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 IGDCC3Q8IVU1 814 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 LRRC52Q8N7C0 313 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 C7orf31Q8N865 590 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 B3GNT5Q9BYG0 378 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 USP29Q9HBJ7 922 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SNX9Q9Y5X1 595 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CAPN7Q9Y6W3 813 aa13.57□□□□□ -0.24
CDK5RAP1-201ENST00000339269 EXOC1LA0A1B0GW35 172 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RRN3P2A6NIE6 340 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SLC15A5A6NIM6 579 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RNF8O76064 485 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ZNF865P0CJ78 1059 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RBP3P10745 1247 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CDH6P55285 790 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 HDAC4P56524 1084 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RASA2Q15283 850 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 HIF1AQ16665 826 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TTC31Q49AM3 519 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ZNF618Q5T7W0 954 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ARHGAP17Q68EM7 881 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CAPN12Q6ZSI9 719 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CCDC121Q6ZUS5 278 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TAB3Q8N5C8 712 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PLD5Q8N7P1 536 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 GDAP1Q8TB36 358 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SPATA18Q8TC71 538 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CLEC4CQ8WTT0 213 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 MZB1Q8WU39 189 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 USP6NLQ92738 828 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CALN1Q9BXU9 219 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 GCOM2Q9BZD3 368 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RSAD1Q9HA92 442 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PCDH18Q9HCL0 1135 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 KCNK9Q9NPC2 374 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FGFR1OP2Q9NVK5 253 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RABGEF1Q9UJ41 708 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 GRID1Q9ULK0 1009 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 GINS2Q9Y248 185 aa13.56□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PDCD11Q14690 1871 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SMIM35A0A1B0GVV1 85 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CCT8L1PA6NM43 557 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 HAS3O00219 553 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PIRO00625 290 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 DYNC1LI2O43237 492 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FKTNO75072 461 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 IGHA2P01877 340 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 VIMP08670 466 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 AKAP5P24588 427 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RPL34P49207 117 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ZNF200P98182 395 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SP3Q02447 781 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 SOX4Q06945 474 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ADCY1Q08828 1119 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 STILQ15468 1287 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CDO1Q16878 200 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 XKR4Q5GH76 650 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 C17orf99Q6UX52 265 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CENPUQ71F23 418 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 CATSPER4Q7RTX7 472 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 FAF2Q96CS3 445 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RNF157Q96PX1 679 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RASA4BC9J798 803 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 RASA4O43374 803 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 PIAS1O75925 651 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 ASMTLO95671 621 aa13.55□□□□□ -0.24
CDK5RAP1-201ENST00000339269 C1QAP02745 245 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms