RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ADCY8P40145 1251 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 CACNA2D1P54289 1103 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 CDH6P55285 790 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 SLC8A3P57103 927 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 ZC3H12AQ5D1E8 599 aaKnown RBP23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 SLC24A5Q71RS6 500 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 ZNF280BQ86YH2 543 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 ART4Q93070 314 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 RTP3Q9BQQ7 232 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 UBN1Q9NPG3 1134 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 DPYSL4O14531 572 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 ETS1P14921 441 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 ACADSBP45954 432 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 HDAC4P56524 1084 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 CALCOCO2Q13137 446 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 ZNF365Q70YC5 407 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 LRRC8DQ7L1W4 858 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 RFX6Q8HWS3 928 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 ARL8AQ96BM9 186 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 FAM149B1Q96BN6 582 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 DEFB118Q96PH6 123 aa23.47■■□□□ 1.35
PDLIM2-203ENST00000339162 TDRD15B5MCY1 1934 aaKnown RBP23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 FAM163BP0C2L3 166 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 FAM200BP0CF97 657 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 ZSCAN5DPP0CG00 497 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 CLLU1OSQ5K130 101 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 GOLGA6L1Q8N7Z2 621 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 ACTL9Q8TC94 416 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 SH3GL2Q99962 352 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 FRMPD3Q5JV73 1810 aa23.46■■□□□ 1.35
PDLIM2-203ENST00000339162 ODC1P11926 461 aa23.45■■□□□ 1.35
PDLIM2-203ENST00000339162 PRMT2P55345 433 aa23.45■■□□□ 1.35
PDLIM2-203ENST00000339162 OTUD4Q01804 1114 aaKnown RBP23.45■■□□□ 1.35
PDLIM2-203ENST00000339162 CA9Q16790 459 aa23.45■■□□□ 1.35
PDLIM2-203ENST00000339162 TMEM121Q9BTD3 319 aa23.45■■□□□ 1.35
PDLIM2-203ENST00000339162 MAGEB5Q9BZ81 275 aa23.45■■□□□ 1.35
PDLIM2-203ENST00000339162 TXLNGYQ9BZA5 131 aa23.45■■□□□ 1.35
PDLIM2-203ENST00000339162 PPFIA2O75334 1257 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 AP1G2O75843 785 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 DDHD2O94830 711 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 ATF2P15336 505 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 ADCY1Q08828 1119 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 TAZQ16635 292 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 UBAP2Q5T6F2 1119 aaKnown RBP23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 GLB1LQ6UWU2 654 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 CTU1Q7Z7A3 348 aaKnown RBP23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 FAM35AQ86V20 835 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 CCDC25Q86WR0 208 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 SMOQ99835 787 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 LRRC4Q9HBW1 653 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 CALCOCO1Q9P1Z2 691 aa23.45■■□□□ 1.34
PDLIM2-203ENST00000339162 NBNO60934 754 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 SYDE1Q6ZW31 735 aaPredicted RBP23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 MYCBPAPQ8TBZ2 947 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 RSPH1Q8WYR4 309 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 SNF8Q96H20 258 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 TMEM209Q96SK2 561 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 FAM204AQ9H8W3 233 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 CYLDQ9NQC7 956 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 MTRF1LQ9UGC7 380 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 ADAM21Q9UKJ8 722 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 CDH9Q9ULB4 789 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 SELPP16109 830 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 PECAM1P16284 738 aaPredicted RBP23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 CDK7P50613 346 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 TKTL1P51854 596 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 ITGA8P53708 1063 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 DPYSL3Q14195 570 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 GPNMBQ14956 572 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 TERF2Q15554 542 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 TTMPQ5BVD1 217 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 CEP85LQ5SZL2 805 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 BBS12Q6ZW61 710 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 B4GALNT4Q76KP1 1039 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 GPRIN1Q7Z2K8 1008 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 FAM126BQ8IXS8 530 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 DEFB106AQ8N104 65 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 PWWP2AQ96N64 755 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 SNRNP25Q9BV90 132 aaKnown RBP23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 SAGE1Q9NXZ1 904 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 WHRNQ9P202 907 aa23.44■■□□□ 1.34
PDLIM2-203ENST00000339162 OPA1O60313 960 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 GBP1P32455 592 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 VCPP55072 806 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 PITX1P78337 314 aaPredicted RBP23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 KRT81Q14533 505 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 OASLQ15646 514 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 KCTD16Q68DU8 428 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 NPNTQ6UXI9 565 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 SIX6OS1Q8N1H7 587 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 ZMIZ2Q8NF64 920 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 TBCBQ99426 244 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 DNAJC17Q9NVM6 304 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 EFR3BQ9Y2G0 817 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 H0YGN5 161 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 KLRC2P26717 231 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 PMS2P54278 862 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 MRPS5P82675 430 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 DCAF6Q58WW2 860 aa23.43■■□□□ 1.34
PDLIM2-203ENST00000339162 EFHC1Q5JVL4 640 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms