RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 TRMT10CQ7L0Y3 403 aaKnown RBP11.61□□□□□ -0.55
LRP1-202ENST00000338962 TTC30AQ86WT1 665 aa11.61□□□□□ -0.55
LRP1-202ENST00000338962 HAUS1Q96CS2 278 aa11.61□□□□□ -0.55
LRP1-202ENST00000338962 PADI3Q9ULW8 664 aa11.61□□□□□ -0.55
LRP1-202ENST00000338962 USP18Q9UMW8 372 aa11.61□□□□□ -0.55
LRP1-202ENST00000338962 ST3GAL5Q9UNP4 418 aa11.61□□□□□ -0.55
LRP1-202ENST00000338962 C2CD4BA6NLJ0 364 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 SHBGP04278 402 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 PFKMP08237 780 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 PCK1P35558 622 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 IRAK1P51617 712 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 DYNLT1P63172 113 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 GNGT1P63211 74 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 SKIDA1Q1XH10 827 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 SV2CQ496J9 727 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 PKDCCQ504Y2 493 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 EMC10Q5UCC4 262 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 PMF1Q6P1K2 205 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 RHBDF2Q6PJF5 856 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 CROCCP2Q86T23 111 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 KCTD6Q8NC69 237 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 SMG8Q8ND04 991 aaKnown RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 APPL2Q8NEU8 664 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 HSPH1Q92598 858 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 PIWIL1Q96J94 861 aaKnown RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 GOLGA2P5Q9HBQ8 144 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 GDAP2Q9NXN4 497 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 C3orf70A6NLC5 250 aaPredicted RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 HUS1O60921 280 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 GRAP2O75791 330 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 CSF2RAP15509 400 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 DESP17661 470 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 KDELR1P24390 212 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 KLRC2P26717 231 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 CD52P31358 61 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 GNL1P36915 607 aaPredicted RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 VCPP55072 806 aaKnown RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 P3H1Q32P28 736 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 IZUMO3Q5VZ72 239 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 TTC19Q6DKK2 380 aaPredicted RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 TTC13Q8NBP0 860 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 SLC35F5Q8WV83 523 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 RXFP2Q8WXD0 754 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 APBB2Q92870 758 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 BADQ92934 168 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 NKD2Q969F2 451 aaPredicted RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 CALN1Q9BXU9 219 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 CDC42EP4Q9H3Q1 356 aaKnown RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 DPEP3Q9H4B8 488 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 CHST12Q9NRB3 414 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 NOVA2Q9UNW9 492 aaKnown RBP11.6□□□□□ -0.55
LRP1-202ENST00000338962 NME7Q9Y5B8 376 aa11.6□□□□□ -0.55
LRP1-202ENST00000338962 SPTLC1O15269 473 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 EIF3HO15372 352 aaKnown RBP eCLIP11.59□□□□□ -0.558e-11■■□□□ 13.3
LRP1-202ENST00000338962 PRPSAP2O60256 369 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 CST8O60676 142 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 TRUB2O95900 331 aaKnown RBP11.59□□□□□ -0.55
LRP1-202ENST00000338962 ITGAVP06756 1048 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 PDGFRBP09619 1106 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 ARSEP51690 589 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 SOX4Q06945 474 aaPredicted RBP11.59□□□□□ -0.55
LRP1-202ENST00000338962 OASLQ15646 514 aaKnown RBP11.59□□□□□ -0.55
LRP1-202ENST00000338962 CDO1Q16878 200 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 ARHGAP17Q68EM7 881 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 OLFML1Q6UWY5 402 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 TMEM110Q86TL2 294 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 ZDHHC17Q8IUH5 632 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 ALLCQ8N6M5 410 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 DBF4BQ8NFT6 615 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 STK32AQ8WU08 396 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
LRP1-202ENST00000338962 AAASQ9NRG9 546 aa11.59□□□□□ -0.55
LRP1-202ENST00000338962 ZMYND8Q9ULU4 1186 aaPredicted RBP11.59□□□□□ -0.55
LRP1-202ENST00000338962 DRG1Q9Y295 367 aaKnown RBP11.59□□□□□ -0.55
LRP1-202ENST00000338962 SGK1O00141 431 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 ACSL3O95573 720 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 CD48P09326 243 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 CCDC130P13994 396 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 SYN1P17600 705 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 SDC4P31431 198 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 CHKAP35790 457 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 BCAT1P54687 386 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 MAGOHP61326 146 aaKnown RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.564e-10■□□□□ 11.2
LRP1-202ENST00000338962 DSC3Q14574 896 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 LRRC31Q6UY01 552 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 BBS12Q6ZW61 710 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 HACE1Q8IYU2 909 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 ADGRF2Q8IZF7 708 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 ACTL9Q8TC94 416 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 SEPT8Q92599 483 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 TNIP3Q96KP6 325 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 ZFP42Q96MM3 310 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 FTHL17Q9BXU8 183 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 RSAD1Q9HA92 442 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms