RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 LINC00854A0A1B0GVQ3 168 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 HOXA2O43364 376 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 HMBSP08397 361 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 STAG3L1P0CL83 205 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 NQO1P15559 274 aaKnown RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 MYBPC2Q14324 1141 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 C10orf120Q5SQS8 335 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 TSEN34Q9BSV6 310 aaKnown RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 DCLRE1BQ9H816 532 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 GMEB1Q9Y692 573 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 NCAM2O15394 837 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 KLRC1P26715 233 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 EPHB2P29323 1055 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 SERPINH1P50454 418 aaKnown RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 KLHL24Q6TFL4 600 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 HS6ST3Q8IZP7 471 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 CENPTQ96BT3 561 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 DNAJC7Q99615 494 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 DSEQ9UL01 958 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 MAGEB16A2A368 324 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 CNOT3O75175 753 aaKnown RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 GUCA1AP43080 201 aaPredicted RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 MMP14P50281 582 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 CYP4Z2PQ8N1L4 340 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 WDR48Q8TAF3 677 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 TMEM106CQ9BVX2 250 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 WDCPQ9H6R7 721 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 MYCP01106 439 aaPredicted RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 TCN1P20061 433 aaPredicted RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 RPS12P25398 132 aaKnown RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 KPNA1P52294 538 aaPredicted RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 TAF1CQ15572 869 aaPredicted RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 ZNF484Q5JVG2 852 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 SEL1L3Q68CR1 1132 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 OR2W6PQ8NHA6 318 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 FAM49BQ9NUQ9 324 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 TAGLN3Q9UI15 199 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 TMA7Q9Y2S6 64 aaKnown RBP13.51□□□□□ -0.25
HLCS-201ENST00000336648 STARD13Q9Y3M8 1113 aa13.51□□□□□ -0.25
HLCS-201ENST00000336648 ARMC4Q5T2S8 1044 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 ERAP2Q6P179 960 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 ACTRT1Q8TDG2 376 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 SLC20A1Q8WUM9 679 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 WDR41Q9HAD4 459 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 RGS18Q9NS28 235 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 RPS6KL1Q9Y6S9 549 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 CNTNAP5Q8WYK1 1306 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 LOC100653049A0A140TA62 436 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 KRT34O76011 436 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 PDE9AO76083 593 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 CRTAMO95727 393 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 ITGALP20701 1170 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 KRT74Q7RTS7 529 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 SCUBE1Q8IWY4 988 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 RIN2Q8WYP3 895 aaPredicted RBP13.5□□□□□ -0.25
HLCS-201ENST00000336648 NARS2Q96I59 477 aaKnown RBP13.5□□□□□ -0.25
HLCS-201ENST00000336648 OGTO15294 1046 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 HNRNPH1P31943 449 aaKnown RBP13.5□□□□□ -0.25
HLCS-201ENST00000336648 MMRN1Q13201 1228 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 CDH18Q13634 790 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 C1DQ13901 141 aaKnown RBP13.5□□□□□ -0.25
HLCS-201ENST00000336648 CYP51A1Q16850 503 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 TFDP3Q5H9I0 405 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 UBXN6Q9BZV1 441 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 SERHL2Q9H4I8 314 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 SERHLQ9NQF3 203 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 AGPAT3Q9NRZ7 376 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 CACNA2D2Q9NY47 1150 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 FAM153AQ9UHL3 310 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 AFF2P51816 1311 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 F5H5T6 163 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 SUPT7LO94864 414 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 MAD2L1Q13257 205 aaPredicted RBP13.5□□□□□ -0.25
HLCS-201ENST00000336648 NFIXQ14938 502 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
HLCS-201ENST00000336648 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 TRIM48Q8IWZ4 208 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 PGBD3Q8N328 593 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 TMC2Q8TDI7 906 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 PPP1R14AQ96A00 147 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 ARMC7Q9H6L4 198 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 COPS7BQ9H9Q2 264 aaPredicted RBP13.5□□□□□ -0.25
HLCS-201ENST00000336648 CRB1P82279 1406 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
HLCS-201ENST00000336648 C6orf222P0C671 652 aaPredicted RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 CATSPER2Q96P56 530 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 FAM111AQ96PZ2 611 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 DYRK1BQ9Y463 629 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 PPP1R3GB7ZBB8 358 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 FYNP06241 537 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 ZNF23P17027 643 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 TKTP29401 623 aaKnown RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 GRK3P35626 688 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 CAMK2GQ13555 558 aaPredicted RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 SGO1Q5FBB7 561 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 TRIQKQ629K1 86 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms