RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
ZNF548-201ENST00000336128 CDH9Q9ULB4 789 aa13.03□□□□□ -0.32
ZNF548-201ENST00000336128 ZNF148Q9UQR1 794 aa13.03□□□□□ -0.32
ZNF548-201ENST00000336128 DRG1Q9Y295 367 aaKnown RBP13.03□□□□□ -0.32
ZNF548-201ENST00000336128 NFS1Q9Y697 457 aa13.03□□□□□ -0.32
ZNF548-201ENST00000336128 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.32
ZNF548-201ENST00000336128 C9IYK1 514 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 INPPL1O15357 1258 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 BEST1O76090 585 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 FAM200BP0CF97 657 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 TFE3P19532 575 aaPredicted RBP13.02□□□□□ -0.33
ZNF548-201ENST00000336128 KLRC2P26717 231 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 BRCC3P46736 316 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 ITGA8P53708 1063 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 CDH6P55285 790 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 ADCY1Q08828 1119 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 OASLQ15646 514 aaKnown RBP13.02□□□□□ -0.33
ZNF548-201ENST00000336128 PAN2Q504Q3 1202 aaKnown RBP13.02□□□□□ -0.33
ZNF548-201ENST00000336128 CEP85LQ5SZL2 805 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 SCYL2Q6P3W7 929 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 RHBDF2Q6PJF5 856 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 CLEC20AQ6ZU45 233 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 ARCQ7LC44 396 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 RTN4RL1Q86UN2 441 aaPredicted RBP13.02□□□□□ -0.33
ZNF548-201ENST00000336128 FAM35AQ86V20 835 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 ALLCQ8N6M5 410 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 CCDC89Q8N998 374 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 OR2W6PQ8NHA6 318 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 SLC35B2Q8TB61 432 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 TEKT4Q8WW24 435 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 KCTD13Q8WZ19 329 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 NCAPGQ9BPX3 1015 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 FRMD8P1Q9BZ68 369 aaPredicted RBP13.02□□□□□ -0.33
ZNF548-201ENST00000336128 GPATCH2LQ9NWQ4 482 aa13.02□□□□□ -0.33
ZNF548-201ENST00000336128 MYBPHLA2RUH7 354 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 TP73O15350 636 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 B3GAT3O94766 335 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 ENDOD1O94919 500 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 CDR1P51861 262 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 HDAC4P56524 1084 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 OTUD4Q01804 1114 aaKnown RBP13.01□□□□□ -0.33
ZNF548-201ENST00000336128 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 KRT81Q14533 505 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 METTL23Q86XA0 190 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 ACTL9Q8TC94 416 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 HASPINQ8TF76 798 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 C11orf84Q9BUA3 381 aaPredicted RBP13.01□□□□□ -0.33
ZNF548-201ENST00000336128 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
ZNF548-201ENST00000336128 SNRNP25Q9BV90 132 aaKnown RBP13.01□□□□□ -0.33
ZNF548-201ENST00000336128 EPB41L4BQ9H329 900 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 SAGE1Q9NXZ1 904 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.33
ZNF548-201ENST00000336128 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 TRIM17Q9Y577 477 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 DAB1O75553 588 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 ITGAVP06756 1048 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 PCSK1P29120 753 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 MAP3K7CLP57077 242 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 CAV1Q03135 178 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 ZNF844Q08AG5 666 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 DPYSL3Q14195 570 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 SLMAPQ14BN4 828 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 BOLA3Q53S33 107 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 EFHC1Q5JVL4 640 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 IZUMO3Q5VZ72 239 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 LRRC8DQ7L1W4 858 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 BBOF1Q8ND07 529 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 SPATA18Q8TC71 538 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 NDRG1Q92597 394 aaKnown RBP13.01□□□□□ -0.33
ZNF548-201ENST00000336128 TBCBQ99426 244 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 ANAPC5Q9UJX4 755 aa13.01□□□□□ -0.33
ZNF548-201ENST00000336128 M0QZQ0 153 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 AP1G2O75843 785 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 CYP11A1P05108 521 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 PAX3P23760 479 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 PDK2Q15119 407 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 ZC3H12AQ5D1E8 599 aaKnown RBP13□□□□□ -0.33
ZNF548-201ENST00000336128 GLB1LQ6UWU2 654 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 SLC24A5Q71RS6 500 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 SIX6OS1Q8N1H7 587 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 GLIS1Q8NBF1 620 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 MYCBPAPQ8TBZ2 947 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 CCHCR1Q8TD31 782 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 RSPH1Q8WYR4 309 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 CENPIQ92674 756 aaPredicted RBP13□□□□□ -0.33
ZNF548-201ENST00000336128 EXOC4Q96A65 974 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 PCED1BQ96HM7 432 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 SMOQ99835 787 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 UNC93B1Q9H1C4 597 aa13□□□□□ -0.33
ZNF548-201ENST00000336128 PABPC3Q9H361 631 aaKnown RBP13□□□□□ -0.33
ZNF548-201ENST00000336128 TMBIM4Q9HC24 238 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms