RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CNTNAP2Q9UHC6 1331 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 CALB2P22676 271 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 SERPINB3P29508 390 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 YWHAEP62258 255 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 MOGSQ13724 837 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 TDRPQ86YL5 185 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 WDR49Q8IV35 697 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 TMEM130Q8N3G9 435 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 CCDC33Q8N5R6 958 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 NKD2Q969F2 451 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 NGRNQ9NPE2 291 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZNF214Q9UL59 606 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 F5H423 210 aaPredicted RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 M0QYV0 167 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 LSM8O95777 96 aaKnown RBP17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 SPATA31D3P0C874 917 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 FGFR1P11362 822 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 CLDN10P78369 228 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 CCDC15Q0P6D6 951 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 KBTBD12Q3ZCT8 623 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 SPATA31D4Q6ZUB0 917 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 WDTC1Q8N5D0 677 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 PPP1R14CQ8TAE6 165 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 C10orf82Q8WW14 230 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 DNAJC9Q8WXX5 260 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 EURLQ9NYK6 297 aa17.22■□□□□ 0.35
CDC42EP4-201ENST00000335793 COPEO14579 308 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 OGTO15294 1046 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 TMEM63AO94886 807 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 ALADP13716 330 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 TCF7P36402 384 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZNF200P98182 395 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 TSNAXIP1Q2TAA8 658 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.21■□□□□ 0.355e-7■■■■□ 23.6
CDC42EP4-201ENST00000335793 ARMCX1Q9P291 453 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 ASB3Q9Y575 518 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 MED7O43513 233 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 TYROBPO43914 113 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 NPTXRO95502 500 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 KCNA3P22001 575 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 EIF4BP23588 611 aaKnown RBP17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 PTPN4P29074 926 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 MIPP30301 263 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 ROR1Q01973 937 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 DYNC1I2Q13409 638 aaKnown RBP17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 TMED1Q13445 227 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 EFHC2Q5JST6 749 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 DRICH1Q6PGQ1 229 aaPredicted RBP17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 STK32AQ8WU08 396 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 TRAPPC12Q8WVT3 735 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 RILPQ96NA2 401 aa17.21■□□□□ 0.35
CDC42EP4-201ENST00000335793 ARL2P36404 184 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 INHBCP55103 352 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 PPP6R3Q5H9R7 873 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 CLNKQ7Z7G1 428 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 PDCD7Q8N8D1 485 aaKnown RBP17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 SLC35B2Q8TB61 432 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZFAND2BQ8WV99 257 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 TEPSINQ96N21 525 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 CPXM1Q96SM3 734 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 DENND2DQ9H6A0 471 aaPredicted RBP17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 I3L4J1 428 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 APRTP07741 180 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 TMPRSS15P98073 1019 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 ACSS3Q9H6R3 686 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 USP18Q9UMW8 372 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 KCNN4O15554 427 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 FAM155BO75949 473 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 PTPRAP18433 802 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 PTDSS1P48651 473 aaKnown RBP17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 DPYSL3Q14195 570 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 LY6KQ17RY6 165 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 PLEKHG4Q58EX7 1191 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 SLC45A4Q5BKX6 768 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 PTPRN2Q92932 1015 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 RPF1Q9H9Y2 349 aaKnown RBP17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 GPATCH2LQ9NWQ4 482 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 SNCAIPQ9Y6H5 919 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 STYXL1Q9Y6J8 313 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 NFASCO94856 1347 aa17.2■□□□□ 0.34
CDC42EP4-201ENST00000335793 TRIM49D1C9J1S8 452 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 MAGEB2O15479 319 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 PRPSAP2O60256 369 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 CCDC22O60826 627 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 T-ENOLP0DO92 83 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 CXCL8P10145 99 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 RGS7P49802 495 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 AP3M2P53677 418 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 CACNA2D1P54289 1103 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 GHRHRQ02643 423 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 PARP6Q2NL67 630 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 INPP5DQ92835 1189 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 SLC7A6OSQ96CW6 309 aaPredicted RBP17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 TMEM120AQ9BXJ8 343 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms