RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 B3GNT9Q6UX72 402 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CDHR3Q6ZTQ4 885 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 PHF13Q86YI8 300 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 POU5F2Q8N7G0 328 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 IL31RAQ8NI17 732 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CHURC1Q8WUH1 139 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 WDR83Q9BRX9 315 aaKnown RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 GALNT8Q9NY28 637 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 TMEM191CA6NGB0 347 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 FKBP6O75344 327 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 PGM3O95394 542 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 TMEM191BP0C7N4 346 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 MYCLP12524 364 aaPredicted RBP14.29□□□□□ -0.12
SYNE3-201ENST00000334258 LIG4P49917 911 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 MTMR1Q13613 665 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 TRIP10Q15642 601 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 IGDCC3Q8IVU1 814 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 NAT8LQ8N9F0 302 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 NAT14Q8WUY8 206 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 DHRS4Q9BTZ2 278 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 ST6GALNAC4Q9H4F1 302 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 PREBQ9HCU5 417 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 ETNK2Q9NVF9 386 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 KAT6AQ92794 2004 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 KRT37O76014 449 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 PDE5AO76074 875 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 DHRS4L1P0CG22 281 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 SP4Q02446 784 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 CCDC142Q17RM4 750 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 SLC39A4Q6P5W5 647 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 DHDDSQ86SQ9 333 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 SATL1Q86VE3 508 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 AZIN2Q96A70 460 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 CEP170P1Q96L14 293 aa14.29□□□□□ -0.12
SYNE3-201ENST00000334258 AVILO75366 819 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 OR6B1O95007 311 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 C6orf222P0C671 652 aaPredicted RBP14.28□□□□□ -0.12
SYNE3-201ENST00000334258 VAV1P15498 845 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 MYBPC3Q14896 1274 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 EFHC1Q5JVL4 640 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 CYP4A22Q5TCH4 519 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 ACAD11Q709F0 780 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 RFX6Q8HWS3 928 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 UNC45BQ8IWX7 931 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SLC35B2Q8TB61 432 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 USP6NLQ92738 828 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 MPP4Q96JB8 637 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 AGBL1Q96MI9 1066 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 PCSK1NQ9UHG2 260 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SOX13Q9UN79 622 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 CAPN14A8MX76 684 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 TOM1L1O75674 476 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 HIRAP54198 1017 aaPredicted RBP14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SPP2Q13103 211 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 LSAMPQ13449 338 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 BMPR2Q13873 1038 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SFT2D3Q587I9 215 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 RABGAP1LQ5R372 815 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 TMEM174Q8WUU8 243 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 FAM151AQ8WW52 585 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SLC44A1Q8WWI5 657 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 ZNF606Q8WXB4 792 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 BSNDQ8WZ55 320 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 CCDC28BQ9BUN5 200 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 APOL6Q9BWW8 343 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 S100A14Q9HCY8 104 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 DDX56Q9NY93 547 aaKnown RBP14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SPATA31D3P0C874 917 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 VCLP18206 1134 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
SYNE3-201ENST00000334258 PSMA2P25787 234 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 EIF3EP60228 445 aaKnown RBP14.28□□□□□ -0.12
SYNE3-201ENST00000334258 OGDHQ02218 1023 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 LGSNQ5TDP6 509 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 TDRD10Q5VZ19 366 aaKnown RBP14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SPATA31D4Q6ZUB0 917 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 TSPAN18Q96SJ8 248 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 CALN1Q9BXU9 219 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 HACL1Q9UJ83 578 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 CCPG1Q9ULG6 757 aa14.28□□□□□ -0.12
SYNE3-201ENST00000334258 RBP3P10745 1247 aa14.27□□□□□ -0.12
SYNE3-201ENST00000334258 AQP4P55087 323 aa14.27□□□□□ -0.12
SYNE3-201ENST00000334258 SH3BGRP55822 239 aaPredicted RBP14.27□□□□□ -0.12
SYNE3-201ENST00000334258 TKFCQ3LXA3 575 aa14.27□□□□□ -0.12
SYNE3-201ENST00000334258 EBF4Q9BQW3 602 aa14.27□□□□□ -0.12
SYNE3-201ENST00000334258 KLHL4Q9C0H6 718 aa14.27□□□□□ -0.12
SYNE3-201ENST00000334258 RHBDL2Q9NX52 303 aa14.27□□□□□ -0.12
SYNE3-201ENST00000334258 DHX15O43143 795 aaKnown RBP14.27□□□□□ -0.13
SYNE3-201ENST00000334258 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.13
SYNE3-201ENST00000334258 ENTPD3O75355 529 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 CALB1P05937 261 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 SNRPAP09012 282 aaKnown RBP14.27□□□□□ -0.13
SYNE3-201ENST00000334258 MMP8P22894 467 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms