RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 GHRP10912 638 aa19.77■□□□□ 0.75
RFTN1-201ENST00000334133 TAZQ16635 292 aa19.77■□□□□ 0.75
RFTN1-201ENST00000334133 ZNF618Q5T7W0 954 aa19.77■□□□□ 0.75
RFTN1-201ENST00000334133 LCLAT1Q6UWP7 414 aa19.77■□□□□ 0.75
RFTN1-201ENST00000334133 ECT2Q9H8V3 914 aa19.77■□□□□ 0.75
RFTN1-201ENST00000334133 GOLGA2P5Q9HBQ8 144 aa19.77■□□□□ 0.75
RFTN1-201ENST00000334133 PSMC3IPQ9P2W1 217 aaPredicted RBP19.77■□□□□ 0.75
RFTN1-201ENST00000334133 ITGA11Q9UKX5 1188 aa19.77■□□□□ 0.75
RFTN1-201ENST00000334133 CCDC130P13994 396 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 GEMIN4P57678 1058 aaKnown RBP19.76■□□□□ 0.75
RFTN1-201ENST00000334133 PARP9Q8IXQ6 854 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 PDIK1LQ8N165 341 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 OR6J1Q8NGC5 347 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 RSAD1Q9HA92 442 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 RAB6BQ9NRW1 208 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 ARL2BPQ9Y2Y0 163 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 CCL15-CCL14A0A0B4J2E2 113 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 HOXA11P31270 313 aaPredicted RBP19.76■□□□□ 0.75
RFTN1-201ENST00000334133 CCL15Q16663 113 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 DPY19L2Q6NUT2 758 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 LVRNQ6Q4G3 990 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 ATP11CQ8NB49 1132 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 NDRG1Q92597 394 aaKnown RBP19.76■□□□□ 0.75
RFTN1-201ENST00000334133 SGSM3Q96HU1 749 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 KATNBL1Q9H079 304 aa19.76■□□□□ 0.75
RFTN1-201ENST00000334133 RBL1P28749 1068 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 YWHAGP61981 247 aaKnown RBP eCLIP19.75■□□□□ 0.75
RFTN1-201ENST00000334133 INCA1Q0VD86 236 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 CEP128Q6ZU80 1094 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 ECHDC2Q86YB7 292 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 DENND1AQ8TEH3 1009 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 FAF2Q96CS3 445 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 GBA2Q9HCG7 927 aaPredicted RBP19.75■□□□□ 0.75
RFTN1-201ENST00000334133 BAIAP2L1Q9UHR4 511 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 DYNC1LI2O43237 492 aaPredicted RBP19.75■□□□□ 0.75
RFTN1-201ENST00000334133 LCP1P13796 627 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 IL4RP24394 825 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 ADRA1DP25100 572 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 XRCC4Q13426 336 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 HHATQ5VTY9 493 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 PCGF5Q86SE9 256 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 FAM228AQ86W67 206 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 RIBC1Q8N443 379 aaPredicted RBP19.75■□□□□ 0.75
RFTN1-201ENST00000334133 CFAP36Q96G28 342 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 VRTNQ9H8Y1 702 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 VTA1Q9NP79 307 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 PHTF1Q9UMS5 762 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 EFR3BQ9Y2G0 817 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 C2CD2Q9Y426 696 aa19.75■□□□□ 0.75
RFTN1-201ENST00000334133 PAPSS1O43252 624 aaPredicted RBP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 FAM155BO75949 473 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 MMP3P08254 477 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 LMO2P25791 158 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 CCNA1P78396 465 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 CEP57Q86XR8 500 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 AGGF1Q8N302 714 aaeCLIP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 PLD5Q8N7P1 536 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 RNF157Q96PX1 679 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 SNRNP25Q9BV90 132 aaKnown RBP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 A8MXQ7 604 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 KBTBD13C9JR72 458 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 DNAJC8O75937 253 aaPredicted RBP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 NCALDP61601 193 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 ELF3P78545 371 aaPredicted RBP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 SPARCL1Q14515 664 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 NOMO1Q15155 1222 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 E2F5Q15329 346 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 MTFR1Q15390 333 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 OLFML1Q6UWY5 402 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 ANKLE1Q8NAG6 615 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 SHCBP1Q8NEM2 672 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 CCDC110Q8TBZ0 833 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 KHSRPQ92945 711 aaKnown RBP eCLIP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 KLHL14Q9P2G3 628 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 SLC17A7Q9P2U7 560 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 STK38LQ9Y2H1 464 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 ACTL7BQ9Y614 415 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 MSH2P43246 934 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 SMAD1Q15797 465 aaKnown RBP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 EFHC2Q5JST6 749 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 IFNLR1Q8IU57 520 aaPredicted RBP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 PCDH19Q8TAB3 1148 aa19.74■□□□□ 0.75
RFTN1-201ENST00000334133 TRIM6Q9C030 488 aaPredicted RBP19.74■□□□□ 0.75
RFTN1-201ENST00000334133 SDC4P31431 198 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 PCK1P35558 622 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 BCAR1P56945 870 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 ZNF200P98182 395 aaPredicted RBP19.73■□□□□ 0.75
RFTN1-201ENST00000334133 POU5F1BQ06416 359 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 GPR142Q7Z601 462 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 TDRPQ86YL5 185 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 SUGP1Q8IWZ8 645 aaKnown RBP19.73■□□□□ 0.75
RFTN1-201ENST00000334133 PQLC3Q8N755 202 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 BRI3BPQ8WY22 251 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 TBC1D31Q96DN5 1066 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 RNF39Q9H2S5 420 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 CACNG4Q9UBN1 327 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 PRKAG3Q9UGI9 489 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 SYNJ2BP-COX16A0A087WUM0 186 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 APRTP07741 180 aa19.73■□□□□ 0.75
RFTN1-201ENST00000334133 RNASELQ05823 741 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms