RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 TMEM221A6NGB7 291 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
CCDC87-201ENST00000333861 TOM1L1O75674 476 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 ALOX15P16050 662 aaPredicted RBP11.57□□□□□ -0.56
CCDC87-201ENST00000333861 TNNI1P19237 187 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 RGS2P41220 211 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 ABCG1P45844 678 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 RAP1GDS1P52306 607 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 MFAP3P55082 362 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 PTK7Q13308 1070 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 PDE1CQ14123 709 aaPredicted RBP11.57□□□□□ -0.56
CCDC87-201ENST00000333861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC87-201ENST00000333861 SLC35B4Q969S0 331 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 KMT5AQ9NQR1 393 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 BARX2Q9UMQ3 279 aaPredicted RBP11.57□□□□□ -0.56
CCDC87-201ENST00000333861 FAF1Q9UNN5 650 aaPredicted RBP11.57□□□□□ -0.56
CCDC87-201ENST00000333861 NAV1Q8NEY1 1877 aa11.57□□□□□ -0.56
CCDC87-201ENST00000333861 IGKV6D-41A0A0C4DH26 115 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 LIASO43766 372 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 MLH1P40692 756 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ELK3P41970 407 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 NCKAP1LP55160 1127 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 CD300CQ08708 224 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 BST1Q10588 318 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 KLF1Q13351 362 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 CCNIQ14094 377 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 TRMT5Q32P41 509 aaKnown RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 C6orf52Q5T4I8 152 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 MROH9Q5TGP6 573 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 BSNDQ8WZ55 320 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ATXN7L3BQ96GX2 97 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 SRPK1Q96SB4 655 aaKnown RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 GLIS2Q9BZE0 524 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 RAB20Q9NX57 234 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PCDHB4Q9Y5E5 795 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PTPRJQ12913 1337 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 HNRNPCL1O60812 293 aaKnown RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 MYCLP12524 364 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 TCN1P20061 433 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PRELPP51888 382 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 C16orf72Q14CZ0 275 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PRKD1Q15139 912 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 HIF1AQ16665 826 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 BANPQ8N9N5 519 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 SHC3Q92529 594 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PGBD4Q96DM1 585 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 DCUN1D5Q9BTE7 237 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 POLR3CQ9BUI4 534 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 C17orf75Q9HAS0 396 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PIM2Q9P1W9 311 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ZNFX1Q9P2E3 1918 aaKnown RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 GMEB1Q9Y692 573 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 C10orf71Q711Q0 1435 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 MYPNQ86TC9 1320 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 TRIM49D1C9J1S8 452 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ITM2AO43736 263 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PSMD10O75832 226 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 GAP43P17677 238 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 SREBF1P36956 1147 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ENTPD1P49961 510 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 CRADDP78560 199 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 DCTN2Q13561 401 aaKnown RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 HIC1Q14526 733 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ANKRD20A4Q4UJ75 823 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 EFHC1Q5JVL4 640 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 GPATCH4Q5T3I0 446 aaKnown RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 IL31Q6EBC2 164 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ATG14Q6ZNE5 492 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 SH3BP5LQ7L8J4 393 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 CDR2LQ86X02 465 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ICA1LQ8NDH6 482 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PPP4R1Q8TF05 950 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 HSPH1Q92598 858 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 SLCO2A1Q92959 643 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PLVAPQ9BX97 442 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ANLNQ9NQW6 1124 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 PRR12Q9ULL5 1215 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 AGTPBP1Q9UPW5 1226 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 RBMX2Q9Y388 322 aaKnown RBP11.56□□□□□ -0.56
CCDC87-201ENST00000333861 ZHX2Q9Y6X8 837 aa11.56□□□□□ -0.56
CCDC87-201ENST00000333861 CAPN14A8MX76 684 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 KBTBD13C9JR72 458 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 IPO5O00410 1097 aaKnown RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 MAGEC1O60732 1142 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 VIL1P09327 827 aaKnown RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 ZNF24P17028 368 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 KCNA4P22459 653 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 HADHBP55084 474 aaKnown RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 OTUD4Q01804 1114 aaKnown RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 CAV1Q03135 178 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 ORC2Q13416 577 aaPredicted RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 MAMLD1Q13495 774 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 BTG3Q14201 252 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms