RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 VTA1Q9NP79 307 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ZNF446Q9NWS9 450 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 GHRP10912 638 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ALDH1A3P47895 512 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 EFEMP1Q12805 493 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 DENND1BQ6P3S1 775 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 RFWD2Q8NHY2 731 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 GRID1Q9ULK0 1009 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 SUPT3HB4E1H0 165 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 F8W8V4 182 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 SUPT3HO75486 399 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 CYBBP04839 570 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ENO3P13929 434 aaPredicted RBP13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ALDH7A1P49419 539 aaKnown RBP13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ERMARDQ5T6L9 678 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 NAPEPLDQ6IQ20 393 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 TMC3Q7Z5M5 1100 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 PRPF39Q86UA1 669 aaKnown RBP13.49□□□□□ -0.25
VSTM4-202ENST00000332853 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 SLITRK1Q96PX8 696 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 DRC3Q9H069 523 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 KCND1Q9NSA2 647 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 LSM7Q9UK45 103 aaKnown RBP13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ASTN2O75129 1339 aaPredicted RBP13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ETS1P14921 441 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 CAPSQ13938 189 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 SLC2A14Q8TDB8 520 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 FBXO32Q969P5 355 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 THTPAQ9BU02 230 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 ZCWPW1Q9H0M4 648 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 REXO2Q9Y3B8 237 aaKnown RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 ADGRA2Q96PE1 1338 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 E5RJQ4 531 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 ENDOD1O94919 500 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 BLOC1S5Q8TDH9 187 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 AENQ8WTP8 325 aaKnown RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 NDE1Q9NXR1 346 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 SMAPO00193 183 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 IGF2BP3O00425 579 aaKnown RBP eCLIP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 NKRFO15226 690 aaKnown RBP eCLIP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 MARCKSL1P49006 195 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 ARID3BQ8IVW6 561 aaPredicted RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 KIAA0319LQ8IZA0 1049 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 KAT2BQ92831 832 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 PPCSQ9HAB8 311 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 IARS2Q9NSE4 1012 aaKnown RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 PCDHGC5Q9Y5F6 944 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 AIM2O14862 343 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 VCPP55072 806 aaKnown RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 RAD51Q06609 339 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 MCL1Q07820 350 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 UGP2Q16851 508 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 SH3BP1Q9Y3L3 701 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 LOC100653049A0A140TA62 436 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 B4GALT5O43286 388 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 KRT34O76011 436 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 TCN1P20061 433 aaPredicted RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 CSE1LP55060 971 aaKnown RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 CTXN3Q4LDR2 81 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 ZRANB3Q5FWF4 1079 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 COLGALT1Q8NBJ5 622 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 OR5B17Q8NGF7 314 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 PBXIP1Q96AQ6 731 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 PGLYRP2Q96PD5 576 aa13.48□□□□□ -0.25
VSTM4-202ENST00000332853 XAB2Q9HCS7 855 aaKnown RBP13.48□□□□□ -0.25
VSTM4-202ENST00000332853 STRNO43815 780 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 PYGBP11216 843 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 GLRBP48167 497 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 PSEN2P49810 448 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 MAPRE1Q15691 268 aaKnown RBP13.47□□□□□ -0.25
VSTM4-202ENST00000332853 LRRC6Q86X45 466 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 UNKQ9C0B0 810 aaKnown RBP13.47□□□□□ -0.25
VSTM4-202ENST00000332853 AMPD1P23109 780 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 ATP13A4Q4VNC1 1196 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 SYT15Q9BQS2 421 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 NAALADL1Q9UQQ1 740 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 E2F6O75461 281 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 PBX1P40424 430 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 PRKCIP41743 596 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 LHX1P48742 406 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 IFI35P80217 286 aaPredicted RBP13.47□□□□□ -0.25
VSTM4-202ENST00000332853 PPIL2Q13356 520 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 ATP6V0D2Q8N8Y2 350 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 FRMD8P1Q9BZ68 369 aaPredicted RBP13.47□□□□□ -0.25
VSTM4-202ENST00000332853 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 SPATA31C2B4DYI2 1134 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 ZNF189O75820 626 aaPredicted RBP13.47□□□□□ -0.25
VSTM4-202ENST00000332853 MIPP30301 263 aa13.47□□□□□ -0.25
VSTM4-202ENST00000332853 C15orf59Q2T9L4 293 aaPredicted RBP13.47□□□□□ -0.25
VSTM4-202ENST00000332853 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.47□□□□□ -0.25
VSTM4-202ENST00000332853 C4orf22Q6V702 233 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms