RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ADAMTS6Q9UKP5 1117 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 ZNF536O15090 1300 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 CCDC195A0A1B0GUA6 201 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 NDC80O14777 642 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 WDR46O15213 610 aaKnown RBP18.88■□□□□ 0.61
PKP3-201ENST00000331563 LIASO43766 372 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 SERPINB8P50452 374 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 ZNF280AP59817 542 aaPredicted RBP18.88■□□□□ 0.61
PKP3-201ENST00000331563 PDE1BQ01064 536 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 FOLH1Q04609 750 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 CLEC16AQ2KHT3 1053 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 HSP90AA5PQ58FG0 334 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 ADGRD1Q6QNK2 874 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 DEPTORQ8TB45 409 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 DQX1Q8TE96 717 aaKnown RBP18.88■□□□□ 0.61
PKP3-201ENST00000331563 SHC3Q92529 594 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 GFM2Q969S9 779 aaKnown RBP18.88■□□□□ 0.61
PKP3-201ENST00000331563 VPS33BQ9H267 617 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 ZDHHC7Q9NXF8 308 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 VAV3Q9UKW4 847 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 CAPN14A8MX76 684 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 PRR5-ARHGAP8B1AHC4 643 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 ARHGAP8P85298 464 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 SLC25A3Q00325 362 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 BTKQ06187 659 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 MOXD1Q6UVY6 613 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 ZSWIM2Q8NEG5 633 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 FIZ1Q96SL8 496 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 WWP1Q9H0M0 922 aa18.88■□□□□ 0.61
PKP3-201ENST00000331563 SPDYE16A6NNV3 312 aaPredicted RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 LSM1O15116 133 aaKnown RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 CLUHO75153 1309 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 UBE4BO95155 1302 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 BRCA1P38398 1863 aaKnown RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 AQP5P55064 265 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 GAD2Q05329 585 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 RABGAP1LQ5R372 815 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 AAGABQ6PD74 315 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 MCOLN2Q8IZK6 566 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 HSPBAP1Q96EW2 488 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 PHF12Q96QT6 1004 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 USP29Q9HBJ7 922 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 TUBA8Q9NY65 449 aaPredicted RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 KCNK4Q9NYG8 393 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 FEM1BQ9UK73 627 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 NUB1Q9Y5A7 615 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 PDE5AO76074 875 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 PROSCO94903 275 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 PIM1P11309 404 aaPredicted RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 HDAC4P56524 1084 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 ZNF200P98182 395 aaPredicted RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 UBAP2LQ14157 1087 aaKnown RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 BBS9Q3SYG4 887 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 TRIM50Q86XT4 487 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 USP6NLQ92738 828 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 PRICKLE1Q96MT3 831 aaPredicted RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 TCHPQ9BT92 498 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 TMEM121Q9BTD3 319 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 MECRQ9BV79 373 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 DENND3A2RUS2 1198 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 PEX10O60683 326 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 SLITRK3O94933 977 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 ALDH2P05091 517 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 HALP42357 657 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 NSFP46459 744 aaKnown RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 NFX1Q12986 1120 aaKnown RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 NADK2Q4G0N4 442 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 ATP13A4Q4VNC1 1196 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 SLC9A9Q8IVB4 645 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 SEMA4DQ92854 862 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 WRNIP1Q96S55 665 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 WRAP73Q9P2S5 460 aaPredicted RBP18.87■□□□□ 0.61
PKP3-201ENST00000331563 SOX13Q9UN79 622 aa18.87■□□□□ 0.61
PKP3-201ENST00000331563 STRNO43815 780 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 PTK7Q13308 1070 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 RNASEH2BQ5TBB1 312 aaKnown RBP18.86■□□□□ 0.61
PKP3-201ENST00000331563 UGT2A3Q6UWM9 527 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 NLRX1Q86UT6 975 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 CHSY1Q86X52 802 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 XXYLT1Q8NBI6 393 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 FBXO36Q8NEA4 188 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 CYP4F11Q9HBI6 524 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 LZTS1Q9Y250 596 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 MRPL11Q9Y3B7 192 aaKnown RBP18.86■□□□□ 0.61
PKP3-201ENST00000331563 KANSL1LA0AUZ9 987 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 PSTPIP1O43586 416 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 TNFAIP1Q13829 316 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 FBXL19Q6PCT2 694 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 NUP93Q8N1F7 819 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 ALLCQ8N6M5 410 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 APOPT1Q96IL0 206 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 SERAC1Q96JX3 654 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 NT5C1BQ96P26 610 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 WDR11Q9BZH6 1224 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 SHOC2Q9UQ13 582 aa18.86■□□□□ 0.61
PKP3-201ENST00000331563 IQANK1A0A1B0GTG1 560 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 FZD9O00144 591 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 INHBAP08476 426 aa18.85■□□□□ 0.61
PKP3-201ENST00000331563 CIITAP33076 1130 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms