RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 FAAP100Q0VG06 881 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 WASHC5Q12768 1159 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 RALGPS1Q5JS13 557 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 GRAMD4Q6IC98 578 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 LLGL2Q6P1M3 1020 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 HIPK4Q8NE63 616 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 TMEM121Q9BTD3 319 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 PADI4Q9UM07 663 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 ZHX2Q9Y6X8 837 aa25.31■■□□□ 1.64
SOX1-201ENST00000330949 PI4K2BG5E9Z4 385 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 KLHL2O95198 593 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 MTMR2Q13614 643 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 KBTBD6Q86V97 674 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 PDIK1LQ8N165 341 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 RAB3IL1Q8TBN0 382 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 DHX38Q92620 1227 aaKnown RBP25.3■■□□□ 1.64
SOX1-201ENST00000330949 WDR83Q9BRX9 315 aaKnown RBP25.3■■□□□ 1.64
SOX1-201ENST00000330949 KLHL11Q9NVR0 708 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 SIRPGQ9P1W8 387 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 ITGA11Q9UKX5 1188 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 ADCY3O60266 1144 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 DKC1O60832 514 aaKnown RBP eCLIP25.3■■□□□ 1.64
SOX1-201ENST00000330949 MTTPP55157 894 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 HDAC4P56524 1084 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 CHI3L2Q15782 390 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 ACCSQ96QU6 501 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 MECRQ9BV79 373 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 PFDN4Q9NQP4 134 aa25.3■■□□□ 1.64
SOX1-201ENST00000330949 MYPNQ86TC9 1320 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 H3BNX3 289 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 POLR2MP0CAP2 368 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 GAD2Q05329 585 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 TEX44Q53QW1 395 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 PACS1Q6VY07 963 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 ZNF677Q86XU0 584 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 CPT1BQ92523 772 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 ZNHIT2Q9UHR6 403 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 APPL1Q9UKG1 709 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 COQ4Q9Y3A0 265 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 CEPT1Q9Y6K0 416 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 KANSL1LA0AUZ9 987 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 WDR46O15213 610 aaKnown RBP25.29■■□□□ 1.64
SOX1-201ENST00000330949 MYBPC1Q00872 1141 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 GSTM4Q03013 218 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 BBS9Q3SYG4 887 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 C2CD6Q53TS8 623 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 APOBEC3HQ6NTF7 200 aaKnown RBP25.29■■□□□ 1.64
SOX1-201ENST00000330949 OTOP1Q7RTM1 612 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 PQLC1Q8N2U9 271 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 NAT8LQ8N9F0 302 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 PLGRKTQ9HBL7 147 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 INIPQ9NRY2 104 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 RSL24D1Q9UHA3 163 aaKnown RBP25.29■■□□□ 1.64
SOX1-201ENST00000330949 PLLPQ9Y342 182 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 AP4B1Q9Y6B7 739 aa25.29■■□□□ 1.64
SOX1-201ENST00000330949 PROCP04070 461 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 KRT1P04264 644 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 FAM58BPP0C7Q3 252 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 RARS2Q5T160 578 aaKnown RBP25.28■■□□□ 1.64
SOX1-201ENST00000330949 ANKRD22Q5VYY1 191 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 MFSD7Q6UXD7 560 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 MON1BQ7L1V2 547 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 NUDCD3Q8IVD9 361 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 CATSPER1Q8NEC5 780 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 PPP1R1BQ9UD71 204 aaPredicted RBP25.28■■□□□ 1.64
SOX1-201ENST00000330949 PSMD13Q9UNM6 376 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 H3BSA7 217 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 CRTAMO95727 393 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 SPIDRQ14159 915 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 CNBD2Q96M20 576 aa25.28■■□□□ 1.64
SOX1-201ENST00000330949 ZNF24P17028 368 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 CREB5Q02930 508 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 CDHR3Q6ZTQ4 885 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 BIRC8Q96P09 236 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 MAF1Q9H063 256 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 SCINQ9Y6U3 715 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 ASTN2O75129 1339 aaPredicted RBP25.27■■□□□ 1.64
SOX1-201ENST00000330949 FUT4P22083 530 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 ECE1P42892 770 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 GJA8P48165 433 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 PDCD4Q53EL6 469 aaKnown RBP25.27■■□□□ 1.64
SOX1-201ENST00000330949 PHF12Q96QT6 1004 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 EBF4Q9BQW3 602 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 CORO1BQ9BR76 489 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 POLRMTO00411 1230 aaKnown RBP25.27■■□□□ 1.64
SOX1-201ENST00000330949 RAB15P59190 212 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 MAMLD1Q13495 774 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 ENOSF1Q7L5Y1 443 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 FBXL13Q8NEE6 735 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 USP6NLQ92738 828 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 VPS50Q96JG6 964 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 TMEM8AQ9HCN3 771 aa25.27■■□□□ 1.64
SOX1-201ENST00000330949 RBBP6Q7Z6E9 1792 aaKnown RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 TRIM43BA6NCK2 446 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 SNNO75324 88 aaPredicted RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 KBTBD12Q3ZCT8 623 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 ATP13A4Q4VNC1 1196 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 TTC39BQ5VTQ0 682 aaPredicted RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 IYDQ6PHW0 289 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 DHRS4L2Q6PKH6 230 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms