RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 COPS2P61201 443 aa21.24■□□□□ 0.99
RIPPLY3-201ENST00000329553 SKIDA1Q1XH10 827 aa21.24■□□□□ 0.99
RIPPLY3-201ENST00000329553 ZNF280BQ86YH2 543 aa21.24■□□□□ 0.99
RIPPLY3-201ENST00000329553 LRRC45Q96CN5 670 aa21.24■□□□□ 0.99
RIPPLY3-201ENST00000329553 UROC1Q96N76 676 aa21.24■□□□□ 0.99
RIPPLY3-201ENST00000329553 USP18Q9UMW8 372 aa21.24■□□□□ 0.99
RIPPLY3-201ENST00000329553 NFS1Q9Y697 457 aa21.24■□□□□ 0.99
RIPPLY3-201ENST00000329553 ANKRD65E5RJM6 399 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 B4GALT3O60512 393 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 TRUB2O95900 331 aaKnown RBP21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 NR1D1P20393 614 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 PCK1P35558 622 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 CDKN2BP42772 138 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 ATP1A2P50993 1020 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 PLCB3Q01970 1234 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 UAP1Q16222 522 aaPredicted RBP21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 CDO1Q16878 200 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 DBF4BQ8NFT6 615 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 FAM118BQ9BPY3 351 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 RTP3Q9BQQ7 232 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 MED10Q9BTT4 135 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 FTHL17Q9BXU8 183 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 TMBIM4Q9HC24 238 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 FAM114A2Q9NRY5 505 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 RASAL2Q9UJF2 1139 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 CDH9Q9ULB4 789 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 DDHD2O94830 711 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 ODC1P11926 461 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 NPR3P17342 541 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 ATP11AP98196 1134 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 TFDP3Q5H9I0 405 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 DCLRE1AQ6PJP8 1040 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 PEBP4Q96S96 227 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 SNX24Q9Y343 169 aa21.23■□□□□ 0.99
RIPPLY3-201ENST00000329553 hCG_1818297A0A087WSY0 165 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 M0QZQ0 153 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 DPYSL4O14531 572 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 PQBP1O60828 265 aaKnown RBP21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 CCNG2Q16589 344 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 NOMO2Q5JPE7 1267 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 CEP85LQ5SZL2 805 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 CLEC20AQ6ZU45 233 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 SLC26A9Q7LBE3 791 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 RSPH1Q8WYR4 309 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 PCED1BQ96HM7 432 aa21.22■□□□□ 0.99
RIPPLY3-201ENST00000329553 ENPP3O14638 875 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 TJP3O95049 919 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 CYP11A1P05108 521 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 KDELR1P24390 212 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 PTPN7P35236 360 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 DRG2P55039 364 aaKnown RBP21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 SLC8A3P57103 927 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 PLEKHG4Q58EX7 1191 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 CYP4V2Q6ZWL3 525 aaPredicted RBP21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 CMASQ8NFW8 434 aaPredicted RBP21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 SLCO2A1Q92959 643 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 HOMER3Q9NSC5 361 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 ECEL1O95672 775 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 SDC4P31431 198 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 ATN1P54259 1190 aaPredicted RBP21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 MAP3K7CLP57077 242 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 MYCBPAPQ8TBZ2 947 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 PPM1EQ8WY54 764 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 NDRG1Q92597 394 aaKnown RBP21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 RABEP2Q9H5N1 569 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 KRT82Q9NSB4 513 aa21.21■□□□□ 0.99
RIPPLY3-201ENST00000329553 CD48P09326 243 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAM200BP0CF97 657 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 PCSK1P29120 753 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 LSP1P33241 339 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 SCNN1AP37088 669 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 RABGGTBP53611 331 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 DSC1Q08554 894 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 ADIGQ0VDE8 80 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 METTL23Q86XA0 190 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 HSPH1Q92598 858 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAM169AQ9Y6X4 670 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 PITPNM1O00562 1244 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 TFE3P19532 575 aaPredicted RBP21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 PAX3P23760 479 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 RPL21P46778 160 aaKnown RBP21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 GUCY1A3Q02108 690 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAM35AQ86V20 835 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 KCTD6Q8NC69 237 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 TET1Q8NFU7 2136 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 ATL2Q8NHH9 583 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 FAM172AQ8WUF8 416 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 KCTD13Q8WZ19 329 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 SUSD3Q96L08 255 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 ACBD6Q9BR61 282 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 NGRNQ9NPE2 291 aaKnown RBP21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 TBC1D13Q9NVG8 400 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 TMEM161AQ9NX61 479 aa21.2■□□□□ 0.98
RIPPLY3-201ENST00000329553 A0A087WUV0 522 aaPredicted RBP21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 CAPN15O75808 1086 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 NDUFV1P49821 464 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 ADCY1Q08828 1119 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 TAZQ16635 292 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 TCTN1Q2MV58 587 aa21.19■□□□□ 0.98
RIPPLY3-201ENST00000329553 ARCQ7LC44 396 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms