RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 MTSS1O43312 755 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 RAMP2O60895 175 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 MBTD1Q05BQ5 628 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 PREPLQ4J6C6 727 aaPredicted RBP14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 C16orf59Q7L2K0 433 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 DNAAF5Q86Y56 855 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 ECHDC2Q86YB7 292 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 MFN1Q8IWA4 741 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 NUP93Q8N1F7 819 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 BADQ92934 168 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
SYNGR1-203ENST00000328933 MYH14Q7Z406 1995 aaKnown RBP14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 RASSF10A6NK89 507 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 SCNN1BP51168 640 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 PDIA2Q13087 525 aaKnown RBP14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 SLC35G1Q2M3R5 365 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 NT5DC1Q5TFE4 455 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 NUGGCQ68CJ6 796 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 RAD9BQ6WBX8 426 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 C12orf29Q8N999 325 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 ATL2Q8NHH9 583 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 CELF6Q96J87 481 aaKnown RBP14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 TRIM54Q9BYV2 358 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 VPS11Q9H270 941 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 RRN3Q9NYV6 651 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 VANGL2Q9ULK5 521 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 ATP5BP06576 529 aaKnown RBP14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 TUBP50607 506 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 HYIQ5T013 277 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 IZUMO3Q5VZ72 239 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 TTC8Q8TAM2 541 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 ATXN7L3BQ96GX2 97 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 ACP6Q9NPH0 428 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 LATS2Q9NRM7 1088 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 TRIM10Q9UDY6 481 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 NFU1Q9UMS0 254 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 TLR5O60602 858 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 SARSP49591 514 aaKnown RBP14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 NFIL3Q16649 462 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 RNF135Q8IUD6 432 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 UBXN6Q9BZV1 441 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 USP18Q9UMW8 372 aa14.97□□□□□ -0.01
SYNGR1-203ENST00000328933 CFAP69A5D8W1 941 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 SNX2O60749 519 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 RALBP11234 206 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 FNDC3BQ53EP0 1204 aaKnown RBP14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 GPR158Q5T848 1215 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 FAM228AQ86W67 206 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 HS6ST3Q8IZP7 471 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 MCRS1Q96EZ8 462 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 ABCC13Q9NSE7 274 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 AMACRQ9UHK6 382 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 TFR2Q9UP52 801 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 MYH2Q9UKX2 1941 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 TGFB1I1O43294 461 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 KLRC4O43908 158 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 NDUFS3O75489 264 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 RARGP13631 454 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 POPDC2Q9HBU9 364 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 ESYT3A0FGR9 886 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 ZNF189O75820 626 aaPredicted RBP14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 CALCAP01258 141 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 JCHAINP01591 159 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 CDC25CP30307 473 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 CHKAP35790 457 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 CNGA2Q16280 664 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 SYTL3Q4VX76 610 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 ZBTB41Q5SVQ8 909 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 RARS2Q5T160 578 aaKnown RBP14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 ZBED8Q8IZ13 594 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 BLOC1S5Q8TDH9 187 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 MCOLN1Q9GZU1 580 aa14.96□□□□□ -0.01
SYNGR1-203ENST00000328933 KRT38O76015 456 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 EPHB4P54760 987 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 MCL1Q07820 350 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 BYSLQ13895 437 aaKnown RBP14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 CDKAL1Q5VV42 579 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 KCTD16Q68DU8 428 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 PRSS55Q6UWB4 352 aaPredicted RBP14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 SLC9A9Q8IVB4 645 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 GPATCH11Q8N954 259 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 ARHGEF26Q96DR7 871 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 ZFATQ9P243 1243 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 DNMT3LQ9UJW3 386 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 PKP3Q9Y446 797 aa14.96□□□□□ -0.02
SYNGR1-203ENST00000328933 TRUB2O95900 331 aaKnown RBP14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 TMTC4Q5T4D3 741 aa14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 TAPT1Q6NXT6 567 aa14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 ZNF571Q7Z3V5 609 aaPredicted RBP14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 ING5Q8WYH8 240 aa14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 ULK4Q96C45 1275 aa14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 HHIPL1Q96JK4 782 aa14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 RP1L1Q8IWN7 2480 aaPredicted RBP14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 ATP1A1P05023 1023 aaKnown RBP14.95□□□□□ -0.02
SYNGR1-203ENST00000328933 TROVE2P10155 538 aaKnown RBP eCLIP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms