RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CXorf38Q8TB03 319 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 PDGFCQ9NRA1 345 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 PSD3Q9NYI0 1048 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 TRPC5OSA6NMA1 111 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 LACTBL1A8MY62 500 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 STK25O00506 426 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 CFLARO15519 480 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 RRM1P23921 792 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 MARSP56192 900 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 YWHAZP63104 245 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 PABPC1LQ4VXU2 614 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 PTRHD1Q6GMV3 140 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 GSPT2Q8IYD1 628 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 GIT1Q9Y2X7 761 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 ATRNL1Q5VV63 1379 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 DIAPH2O60879 1101 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 CTCFP49711 727 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 POLE2P56282 527 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 SLC6A3Q01959 620 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 PTK2BQ14289 1009 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 GRIK5Q16478 980 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 DEFB115Q30KQ5 88 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 FAM43BQ6ZT52 329 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 LRRC43Q8N309 656 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 FAM71DQ8N9W8 422 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 IPMKQ8NFU5 416 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 CAMKK2Q96RR4 588 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 UTP6Q9NYH9 597 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 TSPAN16Q9UKR8 245 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 SMIM35A0A1B0GVV1 85 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 ONECUT3O60422 494 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 GLRA2P23416 452 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 AARSP49588 968 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 SERPINB8P50452 374 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 IKBKEQ14164 716 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 C3orf62Q6ZUJ4 267 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 LRRC52Q8N7C0 313 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 RXFP2Q8WXD0 754 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 RSPH1Q8WYR4 309 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 ADGRE3Q9BY15 652 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 IRX2Q9BZI1 471 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 SLC13A1Q9BZW2 595 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 KCNA2P16389 499 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 GRM5P41594 1212 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 NDST1P52848 882 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 FUT2Q10981 343 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 LRRC23Q53EV4 343 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 USP33Q8TEY7 942 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 ST6GALNAC4Q9H4F1 302 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 THG1LQ9NWX6 298 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 CHMP2BQ9UQN3 213 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 PTCH2Q9Y6C5 1203 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 SMIM10L2AP0DMW4 78 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 SMIM10L2BP0DMW5 78 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 KBTBD12Q3ZCT8 623 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 DUSP28Q4G0W2 176 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 CCDC149Q6ZUS6 474 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 CDC26Q8NHZ8 85 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 ANKRD7Q92527 254 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 NCLNQ969V3 563 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 CELF4Q9BZC1 486 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 SUPT3HO75486 399 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 RHOCP08134 193 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 IRF1P10914 325 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 AP2B1P63010 937 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 MRPS25P82663 173 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 AGAP9Q5VTM2 703 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 KRT80Q6KB66 452 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 XPO6Q96QU8 1125 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 GANQ9H2C0 597 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 TRIM10Q9UDY6 481 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 CDH9Q9ULB4 789 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 TBKBP1A7MCY6 615 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 FGF10O15520 208 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 PRKAA2P54646 552 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 POU5F1Q01860 360 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 TNIP2Q8NFZ5 429 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 FAXDC2Q96IV6 333 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 AGAP3Q96P47 875 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 TMEM39AQ9NV64 488 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 ATP11BQ9Y2G3 1177 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 KCPQ6ZWJ8 1503 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 IGKV6D-41A0A0C4DH26 115 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 PTENP60484 403 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 TWF1Q12792 350 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 CNGA2Q16280 664 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 THEMIS2Q5TEJ8 643 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 TNFRSF25Q93038 417 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 ZNF669Q96BR6 464 aaPredicted RBP11.82□□□□□ -0.52
COL4A5-201ENST00000328300 PCDHA3Q9Y5H8 950 aa11.82□□□□□ -0.52
COL4A5-201ENST00000328300 ERI2A8K979 691 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms