RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CLPTM1LQ96KA5 538 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 CCDC106Q9BWC9 280 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 C1orf21Q9H246 121 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 KRT37O76014 449 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 KRT3P12035 628 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 GSTT1P30711 240 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 CBLBQ13191 982 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 KCNJ11Q14654 390 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 PDCD2Q16342 344 aaPredicted RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 ZNF394Q53GI3 561 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 MDH1BQ5I0G3 518 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 ANGEL2Q5VTE6 544 aaKnown RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 ARID2Q68CP9 1835 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 KYAT3Q6YP21 454 aaKnown RBP17.43■□□□□ 0.38
SSH1-201ENST00000326470 RFX6Q8HWS3 928 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 FNIP1Q8TF40 1166 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 ACAP3Q96P50 834 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 TUBGCP5Q96RT8 1024 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 ZNF341Q9BYN7 854 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 CISHQ9NSE2 258 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 ZNF180Q9UJW8 692 aa17.43■□□□□ 0.38
SSH1-201ENST00000326470 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 WDR46O15213 610 aaKnown RBP17.42■□□□□ 0.38
SSH1-201ENST00000326470 MAFGO15525 162 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 ASNSP08243 561 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 STIP1P31948 543 aaKnown RBP17.42■□□□□ 0.38
SSH1-201ENST00000326470 NRLP54845 237 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 CDC16Q13042 620 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 CUL3Q13618 768 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 TEX44Q53QW1 395 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 WDR78Q5VTH9 848 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 C1orf146Q5VVC0 180 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 XRRA1Q6P2D8 792 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 VSIG10LQ86VR7 867 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 CCDC60Q8IWA6 550 aaPredicted RBP17.42■□□□□ 0.38
SSH1-201ENST00000326470 JOSD2Q8TAC2 188 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 TFAP2BQ92481 460 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 PPP2R3CQ969Q6 453 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 MTBPQ96DY7 904 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 TTC1Q99614 292 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 TARS2Q9BW92 718 aaKnown RBP17.42■□□□□ 0.38
SSH1-201ENST00000326470 DMAP1Q9NPF5 467 aaPredicted RBP17.42■□□□□ 0.38
SSH1-201ENST00000326470 PCMTD2Q9NV79 361 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 ADGRA2Q96PE1 1338 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 K7ERI5 159 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 FKBP6O75344 327 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 KCNA2P16389 499 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 AQP5P55064 265 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 MRPS5P82675 430 aaKnown RBP17.42■□□□□ 0.38
SSH1-201ENST00000326470 CHI3L2Q15782 390 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 CES4AQ5XG92 561 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 PPM1NQ8N819 430 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 SPATA18Q8TC71 538 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 CAMKK2Q96RR4 588 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 FBXO40Q9UH90 709 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 TELO2Q9Y4R8 837 aa17.42■□□□□ 0.38
SSH1-201ENST00000326470 BAG2O95816 211 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 CCND2P30279 289 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 POLR2BP30876 1174 aaKnown RBP17.41■□□□□ 0.38
SSH1-201ENST00000326470 CCNFP41002 786 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 EMC2Q15006 297 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 MTERF2Q49AM1 385 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 PTPN20Q4JDL3 420 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 LGSNQ5TDP6 509 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 ADGRG6Q86SQ4 1221 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 CRLF3Q8IUI8 442 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 CTAGE3PQ8IX95 158 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 KCTD6Q8NC69 237 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 CMASQ8NFW8 434 aaPredicted RBP17.41■□□□□ 0.38
SSH1-201ENST00000326470 RAB3IL1Q8TBN0 382 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 NCSTNQ92542 709 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 APBB2Q92870 758 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 SPATA16Q9BXB7 569 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
SSH1-201ENST00000326470 MKS1Q9NXB0 559 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
SSH1-201ENST00000326470 PPM1HQ9ULR3 514 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 WDR81Q562E7 1941 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 YDJCA8MPS7 323 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 CHADO15335 359 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 BUD23O43709 281 aaKnown RBP17.41■□□□□ 0.38
SSH1-201ENST00000326470 AVILO75366 819 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 SERPINA6P08185 405 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 AP3M2P53677 418 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 HNRNPDQ14103 355 aaKnown RBP17.41■□□□□ 0.38
SSH1-201ENST00000326470 CNPY1Q3B7I2 92 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 RASIP1Q5U651 963 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 AAGABQ6PD74 315 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 NUDCD3Q8IVD9 361 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 TMEM143Q96AN5 459 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 NIF3L1Q9GZT8 377 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 TMEM39BQ9GZU3 492 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 ZNF395Q9H8N7 513 aaPredicted RBP17.41■□□□□ 0.38
SSH1-201ENST00000326470 IL1RAPL1Q9NZN1 696 aa17.41■□□□□ 0.38
SSH1-201ENST00000326470 PRR5-ARHGAP8B1AHC4 643 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 RFPL1O75677 317 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 ATG7O95352 703 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 NAMPTP43490 491 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 ERFP50548 548 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms