RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 BGNP21810 368 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 CCNFP41002 786 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 GPD2P43304 727 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 PSEN1P49768 467 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 CDH8P55286 799 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 YWHAZP63104 245 aaKnown RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 MMRN1Q13201 1228 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 TFDP2Q14188 446 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 KHDC1Q4VXA5 237 aaKnown RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 FAM47CQ5HY64 1035 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 ATF7IP2Q5U623 682 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 CAPRIN2Q6IMN6 1127 aaKnown RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 ANO7Q6IWH7 933 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 TRNP1Q6NT89 227 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 NPNTQ6UXI9 565 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 DSTYKQ6XUX3 929 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 ILDR2Q71H61 639 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 PRPF39Q86UA1 669 aaKnown RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 EXOC8Q8IYI6 725 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 CEP120Q8N960 986 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 C1orf127Q8N9H9 656 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 APBB2Q92870 758 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 SPDL1Q96EA4 605 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 PRR11Q96HE9 360 aaPredicted RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 PDGFDQ9GZP0 370 aaPredicted RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 SYNCQ9H7C4 482 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 VRTNQ9H8Y1 702 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 PLAC1Q9HBJ0 212 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 ALG13Q9NP73 1137 aaKnown RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 FBXO6Q9NRD1 293 aaPredicted RBP9.07□□□□□ -0.96
CLK1-201ENST00000321356 ASNSD1Q9NWL6 643 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 MKS1Q9NXB0 559 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 STOML1Q9UBI4 398 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 HMGXB4Q9UGU5 601 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 IKBKGQ9Y6K9 419 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 PTPRFP10586 1907 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 SOWAHBA6NEL2 793 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 C2CD4BA6NLJ0 364 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 E5RJQ4 531 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 LGR5O75473 907 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 HMGCRP04035 888 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 RARBP10826 455 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 PRKCHP24723 683 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 GMPSP49915 693 aaPredicted RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 YWHAGP61981 247 aaKnown RBP eCLIP9.06□□□□□ -0.96
CLK1-201ENST00000321356 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ANGEL2Q5VTE6 544 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 TTC39BQ5VTQ0 682 aaPredicted RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 EEF1DP3Q658K8 133 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 DARS2Q6PI48 645 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 CDHR3Q6ZTQ4 885 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 DHX37Q8IY37 1157 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 LRRC71Q8N4P6 559 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 MICAL1Q8TDZ2 1067 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 USP6NLQ92738 828 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 KLRG1Q96E93 195 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 OXNAD1Q96HP4 312 aaPredicted RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 TMEM176AQ96HP8 235 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ZNF333Q96JL9 665 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 C7orf26Q96N11 449 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 RNF157Q96PX1 679 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 CAMKK2Q96RR4 588 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 SRPK1Q96SB4 655 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 FAM167BQ9BTA0 163 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 OSBPL1AQ9BXW6 950 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 CDT1Q9H211 546 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 SMYD3Q9H7B4 428 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 CYP3A43Q9HB55 503 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 POPDC2Q9HBU9 364 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ARHGEF4Q9NR80 690 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.06□□□□□ -0.96
CLK1-201ENST00000321356 TAS2R1Q9NYW7 299 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ZFATQ9P243 1243 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 PAK5Q9P286 719 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 FZD1Q9UP38 647 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ZSWIM8A7E2V4 1837 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 BRCA1P38398 1863 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 CCDC189A1A4V9 331 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 CAPN14A8MX76 684 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 TRIM49D1C9J1S8 452 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 H0Y3Z8 333 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 M0QYV0 167 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 FCHO1O14526 889 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 COPEO14579 308 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 TRDMT1O14717 391 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 GYG2O15488 501 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 B4GALT5O43286 388 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 AVILO75366 819 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 SKAP2O75563 359 aaPredicted RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 RFPL1O75677 317 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 NFICP08651 508 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 SNRPAP09012 282 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 CXCL8P10145 99 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 MYL2P10916 166 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 VDRP11473 427 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 GPD1P21695 349 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 IL4RP24394 825 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 VHLP40337 213 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 MAGEA3P43357 314 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms