RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 TBC1D12O60347 775 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 NELFEP18615 380 aaKnown RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 EIF2B2P49770 351 aaKnown RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 NDST2P52849 883 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 RAB15P59190 212 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 PTP4A2Q12974 167 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 DEPDC1Q5TB30 811 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 KAZNQ674X7 775 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 SNRNP48Q6IEG0 339 aaKnown RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 RINT1Q6NUQ1 792 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 SAPCD2Q86UD0 394 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 RHPN2Q8IUC4 686 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 LILRA2Q8N149 483 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 GALNT4Q8N4A0 578 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 OGFOD1Q8N543 542 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 TRIML2Q8N7C3 387 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 RAB3IL1Q8TBN0 382 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 RPGRQ92834 1020 aaKnown RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 PLEKHA8Q96JA3 519 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 DCUN1D5Q9BTE7 237 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 TPK1Q9H3S4 243 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 GINM1Q9NU53 330 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 IGSF9Q9P2J2 1179 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 RIMS3Q9UJD0 308 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ATF5Q9Y2D1 282 aaPredicted RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 GIT1Q9Y2X7 761 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 FARP1Q9Y4F1 1045 aaPredicted RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 SCN7AQ01118 1682 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ZMPSTE24O75844 475 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ZBTB11O95625 1053 aaPredicted RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 ZNF12P17014 697 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 CA8P35219 290 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 NT5C2P49902 561 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 KCNC4Q03721 635 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ATP1A4Q13733 1029 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ADGRE1Q14246 886 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 MYBPC2Q14324 1141 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ATP13A4Q4VNC1 1196 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 SMUG1Q53HV7 270 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 RARS2Q5T160 578 aaKnown RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 METTL21CQ5VZV1 264 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 USP17L6PQ6QN14 398 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 FBXO33Q7Z6M2 555 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 SDR16C5Q8N3Y7 309 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 NEDD1Q8NHV4 660 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 TFB1MQ8WVM0 346 aaKnown RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 STARD8Q92502 1023 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 SHC3Q92529 594 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ELMO3Q96BJ8 720 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 ZNF778Q96MU6 729 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 GBA3Q9H227 469 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 JMJD4Q9H9V9 463 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 SIRPGQ9P1W8 387 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 HERC5Q9UII4 1024 aaKnown RBP8.26□□□□□ -1.09
RTL3-201ENST00000321110 ITGA11Q9UKX5 1188 aa8.26□□□□□ -1.09
RTL3-201ENST00000321110 AHDC1Q5TGY3 1603 aaPredicted RBP8.25□□□□□ -1.09
RTL3-201ENST00000321110 MYH11P35749 1972 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 IQANK1A0A1B0GTG1 560 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 TISP43B9A030 160 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 COPEO14579 308 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 SNNO75324 88 aaPredicted RBP8.25□□□□□ -1.09
RTL3-201ENST00000321110 FAM155BO75949 473 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 FAM13AO94988 1023 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 IFNB1P01574 187 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 GAP43P17677 238 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 CDH3P22223 829 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 PRDX6P30041 224 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 HSPA1LP34931 641 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 CDK8P49336 464 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 KPNA1P52294 538 aaPredicted RBP8.25□□□□□ -1.09
RTL3-201ENST00000321110 YWHAGP61981 247 aaKnown RBP eCLIP8.25□□□□□ -1.09
RTL3-201ENST00000321110 MRPS5P82675 430 aaKnown RBP8.25□□□□□ -1.09
RTL3-201ENST00000321110 CDK18Q07002 472 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 SLC15A2Q16348 729 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 ZCCHC23Q6ZST2 131 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 CRLF3Q8IUI8 442 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 CHERPQ8IWX8 916 aaKnown RBP8.25□□□□□ -1.09
RTL3-201ENST00000321110 KATNAL2Q8IYT4 538 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 BORCS5Q969J3 196 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 VTI1AQ96AJ9 217 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 TMEM121Q9BTD3 319 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 APOL6Q9BWW8 343 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 COPS7BQ9H9Q2 264 aaPredicted RBP8.25□□□□□ -1.09
RTL3-201ENST00000321110 PLLPQ9Y342 182 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 RABGAP1Q9Y3P9 1069 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 COL16A1Q07092 1604 aaPredicted RBP8.25□□□□□ -1.09
RTL3-201ENST00000321110 ARFGEF1Q9Y6D6 1849 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 LOC100653049A0A140TA62 436 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 ZBTB39O15060 712 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 SIN3BO75182 1162 aa8.25□□□□□ -1.09
RTL3-201ENST00000321110 KRT34O76011 436 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms