RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 TNIP3Q96KP6 325 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 TRIM15Q9C019 465 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 MROH8Q9H579 483 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 KDM3BQ7LBC6 1761 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 LRRC8EQ6NSJ5 796 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 IFNEQ86WN2 208 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 FAM172AQ8WUF8 416 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 SPATA17Q96L03 361 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 FHDC1Q9C0D6 1143 aaPredicted RBP15.97■□□□□ 0.15
GCFC2-201ENST00000321027 AJAP1Q9UKB5 411 aaPredicted RBP15.97■□□□□ 0.15
GCFC2-201ENST00000321027 RPS6KL1Q9Y6S9 549 aa15.97■□□□□ 0.15
GCFC2-201ENST00000321027 OAZ1P54368 228 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 PTPN11Q06124 597 aaPredicted RBP15.96■□□□□ 0.15
GCFC2-201ENST00000321027 ARHGEF6Q15052 776 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 DGKDQ16760 1214 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 GALNT4Q8N4A0 578 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 SLC25A41Q8N5S1 370 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 OSBPL7Q9BZF2 842 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 SP110Q9HB58 689 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 LMCD1Q9NZU5 365 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 GGA2Q9UJY4 613 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 KBTBD13C9JR72 458 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 RARS2Q5T160 578 aaKnown RBP15.96■□□□□ 0.15
GCFC2-201ENST00000321027 CCDC60Q8IWA6 550 aaPredicted RBP15.96■□□□□ 0.15
GCFC2-201ENST00000321027 ZCCHC9Q8N567 271 aaKnown RBP15.96■□□□□ 0.15
GCFC2-201ENST00000321027 RMDN1Q96DB5 314 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 SGF29Q96ES7 293 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 AURKCQ9UQB9 309 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 RGPD5Q99666 1765 aa15.96■□□□□ 0.15
GCFC2-201ENST00000321027 SRRM3A6NNA2 597 aaPredicted RBP15.96■□□□□ 0.14
GCFC2-201ENST00000321027 KLHL2O95198 593 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 PAX7P23759 505 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 RECQLP46063 649 aaPredicted RBP15.96■□□□□ 0.14
GCFC2-201ENST00000321027 MAMLD1Q13495 774 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 VGLL4Q14135 290 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 MTFR1Q15390 333 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 STILQ15468 1287 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 MAP1SQ66K74 1059 aaPredicted RBP15.96■□□□□ 0.14
GCFC2-201ENST00000321027 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.14
GCFC2-201ENST00000321027 TRAPPC12Q8WVT3 735 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 TEKT4Q8WW24 435 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 SNX19Q92543 992 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 ZNF518BQ9C0D4 1074 aa15.96■□□□□ 0.14
GCFC2-201ENST00000321027 ASCC2Q9H1I8 757 aaPredicted RBP15.96■□□□□ 0.14
GCFC2-201ENST00000321027 DNM1LO00429 736 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 GRIN3BO60391 1043 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 NPTXRO95502 500 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 VTNP04004 478 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 POLBP06746 335 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 HSD17B4P51659 736 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 C20orf96Q9NUD7 363 aaPredicted RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 SLC39A10Q9ULF5 831 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 R3HDM2Q9Y2K5 976 aaKnown RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 GOLGA4Q13439 2230 aaKnown RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 COL1A1P02452 1464 aaPredicted RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 LRRC37A3O60309 1634 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 TGFB3P10600 412 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 GFAPP14136 432 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 SOX11P35716 441 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 ARHGDIAP52565 204 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 TAS2R40P59535 323 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 UGCGQ16739 394 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 KIZQ2M2Z5 673 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 BTBD8Q5XKL5 378 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 TTC27Q6P3X3 843 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 FAM131BQ86XD5 332 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 CNPY3Q9BT09 278 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 CEP41Q9BYV8 373 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 UBXN6Q9BZV1 441 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 MYH10P35580 1976 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 FSCN2O14926 492 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 KCNA2P16389 499 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 SPRP35270 261 aaPredicted RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 RPL10AP62906 217 aaKnown RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 FAAP100Q0VG06 881 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 LBRQ14739 615 aaKnown RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 GNASQ5JWF2 1037 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 CMTM5Q96DZ9 223 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 VCPIP1Q96JH7 1222 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 GPRC5DQ9NZD1 345 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 AFF4Q9UHB7 1163 aaKnown RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 SLIT2O94813 1529 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 SEC24DO94855 1032 aaPredicted RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 LSM8O95777 96 aaKnown RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 COPAP53621 1224 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 PREPLQ4J6C6 727 aaPredicted RBP15.95■□□□□ 0.14
GCFC2-201ENST00000321027 MTHFD1LQ6UB35 978 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 MPZL3Q6UWV2 235 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 EPAS1Q99814 870 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 APOL2Q9BQE5 337 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 SLC13A4Q9UKG4 626 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 UBIAD1Q9Y5Z9 338 aa15.95■□□□□ 0.14
GCFC2-201ENST00000321027 MYH2Q9UKX2 1941 aa15.94■□□□□ 0.14
GCFC2-201ENST00000321027 FCHO1O14526 889 aa15.94■□□□□ 0.14
GCFC2-201ENST00000321027 WDR49Q8IV35 697 aa15.94■□□□□ 0.14
GCFC2-201ENST00000321027 KATNAL2Q8IYT4 538 aa15.94■□□□□ 0.14
GCFC2-201ENST00000321027 APPL2Q8NEU8 664 aa15.94■□□□□ 0.14
GCFC2-201ENST00000321027 DNAJC16Q9Y2G8 782 aa15.94■□□□□ 0.14
GCFC2-201ENST00000321027 SNX5Q9Y5X3 404 aa15.94■□□□□ 0.14
GCFC2-201ENST00000321027 CALB2P22676 271 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms