RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 RAG1P15918 1043 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 TDRD10Q5VZ19 366 aaKnown RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 POLNQ7Z5Q5 900 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 ARPINQ7Z6K5 226 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 HPS6Q86YV9 775 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 LENG1Q96BZ8 264 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 APOBEC3GQ9HC16 384 aaKnown RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 SOX13Q9UN79 622 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 PTPRJQ12913 1337 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 MAGEB3O15480 346 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 TPP2P29144 1249 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 STIP1P31948 543 aaKnown RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 MROH9Q5TGP6 573 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 IYDQ6PHW0 289 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 GMCL1Q96IK5 515 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 CALN1Q9BXU9 219 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 PPCSQ9HAB8 311 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 AK5Q9Y6K8 562 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 THSD7BQ9C0I4 1608 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 E2F8A0AVK6 867 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 ATP6V1G1O75348 118 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 VIL1P09327 827 aaKnown RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 MSX2P35548 267 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 GALK1P51570 392 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 GK3PQ14409 553 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 TAF5Q15542 800 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 TRAPPC3LQ5T215 181 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 NPNTQ6UXI9 565 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 RFX6Q8HWS3 928 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 SLC35B2Q8TB61 432 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 SLC44A1Q8WWI5 657 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 MXRA8Q9BRK3 442 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 CCDC106Q9BWC9 280 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 IL1RAPL1Q9NZN1 696 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 TMCO1Q9UM00 188 aa10.05□□□□□ -0.8
PTPRA-202ENST00000318266 DRG1Q9Y295 367 aaKnown RBP10.05□□□□□ -0.8
PTPRA-202ENST00000318266 TMEM191CA6NGB0 347 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 TMEM191BP0C7N4 346 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 MYCLP12524 364 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 GTF2H1P32780 548 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 CHN2P52757 468 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 MRPS5P82675 430 aaKnown RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 FOLH1Q04609 750 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 CCNIQ14094 377 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 AOC3Q16853 763 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 TMCO4Q5TGY1 634 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 C16orf46Q6P387 395 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 USP37Q86T82 979 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 CPXCR1Q8N123 301 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 NDUFAF2Q8N183 169 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 GPD1LQ8N335 351 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 EMC1Q8N766 993 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 HSPH1Q92598 858 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 MIS12Q9H081 205 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 TJP2Q9UDY2 1190 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 ZSCAN9O15535 394 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 FKBP6O75344 327 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 TRPA1O75762 1119 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 RBP3P10745 1247 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 NCF2P19878 526 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 PMLP29590 882 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 EIF3EP60228 445 aaKnown RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 TMEM62Q0P6H9 643 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 CUL2Q13617 745 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 ZBTB41Q5SVQ8 909 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 VWA5B1Q5TIE3 1220 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 ATG16L1Q676U5 607 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 DRICH1Q6PGQ1 229 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 PCGF5Q86SE9 256 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 DEFB107AQ8IZN7 70 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 ICA1LQ8NDH6 482 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 ZNF606Q8WXB4 792 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 CNBD2Q96M20 576 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 MFSD14AQ96MC6 490 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 COL20A1Q9P218 1284 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 SLC9A2Q9UBY0 812 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
PTPRA-202ENST00000318266 HBS1LQ9Y450 684 aaKnown RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 ASTN2O75129 1339 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-202ENST00000318266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 F5H423 210 aaPredicted RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 H0YIN7 160 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 PMM2O15305 246 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 CLPTM1O96005 669 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 PSMA2P25787 234 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 IL1R2P27930 398 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 CPOXP36551 454 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 NCKAP1LP55160 1127 aa10.03□□□□□ -0.8
PTPRA-202ENST00000318266 NLRP11P59045 1033 aaKnown RBP10.03□□□□□ -0.8
PTPRA-202ENST00000318266 COG7P83436 770 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms