RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 RRN3P2A6NIE6 340 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 NDUFS3O75489 264 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 SPRP35270 261 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 NOL9Q5SY16 702 aaKnown RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 PLPP4Q5VZY2 271 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ZNF614Q8N883 585 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 RDM1Q8NG50 284 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ZNF512BQ96KM6 892 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 RPRD1AQ96P16 312 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 SPATC1LQ9H0A9 340 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 BRD8Q9H0E9 1235 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ZMYND8Q9ULU4 1186 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 CAPN6Q9Y6Q1 641 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 WTIPA6NIX2 430 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 UBOX5O94941 541 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 GRIK4Q16099 956 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 SETD3Q86TU7 594 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 BLOC1S5Q8TDH9 187 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 COPS5Q92905 334 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 WNK4Q96J92 1243 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 PAPOLBQ9NRJ5 636 aaKnown RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 IQGAP3Q86VI3 1631 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 NCOA3Q9Y6Q9 1424 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 PEX10O60683 326 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 PIGHQ14442 188 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 TMED8Q6PL24 325 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 OOSP2Q86WS3 158 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 C10orf53Q8N6V4 93 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 SPATA18Q8TC71 538 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 MAGEB2O15479 319 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ALBP02768 609 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ANTXR2P58335 489 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 CNTN2Q02246 1040 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 MAPK7Q13164 816 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 EDRF1Q3B7T1 1238 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 TTC39CQ8N584 583 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 GTF3C2Q8WUA4 911 aaPredicted RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ERGIC2Q96RQ1 377 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 BBS2Q9BXC9 721 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 FAM129AQ9BZQ8 928 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 UNKQ9C0B0 810 aaKnown RBP14.36□□□□□ -0.11
EDEM3-201ENST00000318130 IL1RAPL1Q9NZN1 696 aa14.36□□□□□ -0.11
EDEM3-201ENST00000318130 ARHGEF40Q8TER5 1519 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 M0QYT0 321 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SLC37A4O43826 429 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SP3Q02447 781 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 FSCN1Q16658 493 aaKnown RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 PLEKHM3Q6ZWE6 761 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 GPC2Q8N158 579 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 EDEM1Q92611 657 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 IL25Q9H293 177 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 ANKZF1Q9H8Y5 726 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 PAK5Q9P286 719 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CAB39Q9Y376 341 aaPredicted RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 NEXMIFQ5QGS0 1516 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SLC12A8A0AV02 714 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CST8O60676 142 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 RNASEH1O60930 286 aaKnown RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SNUPNO95149 360 aaKnown RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 ICAM1P05362 532 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 UGP2Q16851 508 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 AARS2Q5JTZ9 985 aaKnown RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SLC13A5Q86YT5 568 aaPredicted RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CCDC60Q8IWA6 550 aaPredicted RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SCUBE1Q8IWY4 988 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 PPRC1Q5VV67 1664 aaKnown RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 E7ENQ6 273 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 PMPCBO75439 489 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CHRM3P20309 590 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SUGP1Q8IWZ8 645 aaKnown RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 PPIL6Q8IXY8 311 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CNPY4Q8N129 248 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 WDCPQ9H6R7 721 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 NDUFA13Q9P0J0 144 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 TRPM1Q7Z4N2 1603 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 DGAT1O75907 488 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 ALDH1A2O94788 518 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CCDC142Q17RM4 750 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CEP78Q5JTW2 689 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 IZUMO2Q6UXV1 221 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 FAM71DQ8N9W8 422 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 JADE3Q92613 823 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 SYN2Q92777 582 aaPredicted RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 NT5C1AQ9BXI3 368 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 DCLRE1BQ9H816 532 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 NT5C1B-RDH14C9J2C7 533 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 ATP9AO75110 1047 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 TAF6P49848 677 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 PWP1Q13610 501 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 GAS2L1Q99501 681 aaPredicted RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 THAP2Q9H0W7 228 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 IPPQ9Y573 584 aa14.35□□□□□ -0.11
EDEM3-201ENST00000318130 COPG1Q9Y678 874 aaKnown RBP14.35□□□□□ -0.11
EDEM3-201ENST00000318130 CBX4O00257 560 aa14.34□□□□□ -0.11
EDEM3-201ENST00000318130 STRNO43815 780 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms