RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TRUB2O95900 331 aaKnown RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 MIPP30301 263 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 THOC5Q13769 683 aaKnown RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 SURF1Q15526 300 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 THEMIS2Q5TEJ8 643 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 SNRNP48Q6IEG0 339 aaKnown RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 PRPF39Q86UA1 669 aaKnown RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 DTX3LQ8TDB6 740 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 FRMD8Q9BZ67 464 aaPredicted RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 METTL5Q9NRN9 209 aaKnown RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 PLA2G4CQ9UP65 541 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 TRIM49D1C9J1S8 452 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 MAP3K7O43318 606 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 MED7O43513 233 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 TOM1L1O75674 476 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 NRLP54845 237 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 TRPC3Q13507 836 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 TAF5Q15542 800 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 TARBP2Q15633 366 aaKnown RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 ZNF699Q32M78 642 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 NET1Q7Z628 596 aaPredicted RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 TREML1Q86YW5 311 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 EMC1Q8N766 993 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 DDX43Q9NXZ2 648 aaKnown RBP19.9■□□□□ 0.78
RTN4-201ENST00000317610 SIRPGQ9P1W8 387 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 PHIPQ8WWQ0 1821 aa19.9■□□□□ 0.78
RTN4-201ENST00000317610 LCTP09848 1927 aa19.89■□□□□ 0.78
RTN4-201ENST00000317610 IGKV6D-21A0A0A0MT36 114 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 B2RBV5 119 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 I3L4J1 428 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 MSCO60682 206 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 ATP5BP06576 529 aaKnown RBP19.89■□□□□ 0.77
RTN4-201ENST00000317610 SNRPAP09012 282 aaKnown RBP19.89■□□□□ 0.77
RTN4-201ENST00000317610 AMPD1P23109 780 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 GSTA3Q16772 222 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 SCARA5Q6ZMJ2 495 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 CPXM1Q96SM3 734 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 ZNF184Q99676 751 aaPredicted RBP19.89■□□□□ 0.77
RTN4-201ENST00000317610 IQCGQ9H095 443 aaKnown RBP19.89■□□□□ 0.77
RTN4-201ENST00000317610 PCSK1NQ9UHG2 260 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 CPSF3Q9UKF6 684 aaKnown RBP19.89■□□□□ 0.77
RTN4-201ENST00000317610 ANGPTL2Q9UKU9 493 aa19.89■□□□□ 0.77
RTN4-201ENST00000317610 ZNF214Q9UL59 606 aaPredicted RBP19.89■□□□□ 0.77
RTN4-201ENST00000317610 MAGEA13PA6NCF6 341 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 ERBB2P04626 1255 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 PRKCHP24723 683 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 PAPOLAP51003 745 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 YWHAZP63104 245 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 BST1Q10588 318 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 TEX44Q53QW1 395 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 ATG16L1Q676U5 607 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 DARS2Q6PI48 645 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 KBTBD2Q8IY47 623 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 SLC4A11Q8NBS3 891 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 SMC1BQ8NDV3 1235 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 TRAPPC9Q96Q05 1148 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 MRPL4Q9BYD3 311 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 PAPOLBQ9NRJ5 636 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 USP18Q9UMW8 372 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 ADAMTS5Q9UNA0 930 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 WASF2Q9Y6W5 498 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 SSC5DA1L4H1 1573 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 TRDMT1O14717 391 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 OGTO15294 1046 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 KRT37O76014 449 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 HOXC6P09630 235 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 GNAT1P11488 350 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 ICAM3P32942 547 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 MRPS5P82675 430 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 TRMT5Q32P41 509 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 ZBTB33Q86T24 672 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 ZC3H18Q86VM9 953 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 MFN1Q8IWA4 741 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 RBM15BQ8NDT2 890 aaKnown RBP19.88■□□□□ 0.77
RTN4-201ENST00000317610 RAB3IL1Q8TBN0 382 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 ZFAND2BQ8WV99 257 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 HSPH1Q92598 858 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 ZBTB10Q96DT7 871 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 RTP4Q96DX8 246 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 POPDC2Q9HBU9 364 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 DNAJB4Q9UDY4 337 aa19.88■□□□□ 0.77
RTN4-201ENST00000317610 TM7SF2O76062 418 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 CES4AQ5XG92 561 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 CWF19L1Q69YN2 538 aaKnown RBP19.87■□□□□ 0.77
RTN4-201ENST00000317610 NPNTQ6UXI9 565 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 GALNT15Q8N3T1 639 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 E2F7Q96AV8 911 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 FAF2Q96CS3 445 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 MCRS1Q96EZ8 462 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 FAM161BQ96MY7 647 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 WWP1Q9H0M0 922 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 PLAC1Q9HBJ0 212 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 USP29Q9HBJ7 922 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 PAK5Q9P286 719 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 TAGLN3Q9UI15 199 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 ANK1P16157 1881 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 H3BRJ5 948 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 AVILO75366 819 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 RFPL1O75677 317 aa19.87■□□□□ 0.77
RTN4-201ENST00000317610 RNF8O76064 485 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms