RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 LMBRD1Q9NUN5 540 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 BSDC1Q9NW68 430 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 WDR35Q9P2L0 1181 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 DENND4BO75064 1496 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 NCF1BA6NI72 391 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 NCF1CA8MVU1 366 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 RPS6KA5O75582 802 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 GH2P01242 217 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 NCF1P14598 390 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 CPA3P15088 417 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 H2AFXP16104 143 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 CEBPGP53567 150 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 MRPS25P82663 173 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 DRAP1Q14919 205 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 SWI5Q1ZZU3 235 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 MZT2BQ6NZ67 158 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 HOMEZQ8IX15 550 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 RAVER2Q9HCJ3 691 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 TMEM63CQ9P1W3 806 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 PIM2Q9P1W9 311 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 TMA7Q9Y2S6 64 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 MMP1P03956 469 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 GPSM2P81274 684 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 MYBPC1Q00872 1141 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 RESTQ13127 1097 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 NAPEPLDQ6IQ20 393 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 MRPS31Q92665 395 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 SENP7Q9BQF6 1050 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 INTS7Q9NVH2 962 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 PRR12Q9ULL5 1215 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 TDRKHQ9Y2W6 561 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 CKBP12277 381 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 PTPN3P26045 913 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 UNC13DQ70J99 1090 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 SVOPQ8N4V2 548 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 DNAJC11Q9NVH1 559 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 A0A1W2PQ27 194 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 A0A1W2PQ64 194 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 A0A1W2PQD8 194 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 H7C4K7 107 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 PARNO95453 639 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 STAG3L1P0CL83 205 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 EIF2B2P49770 351 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
AFF3-201ENST00000317233 CHST12Q9NRB3 414 aa13.59□□□□□ -0.23
AFF3-201ENST00000317233 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.23
AFF3-201ENST00000317233 USP17L10C9JJH3 530 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 SERPINB8P50452 374 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 IL5RAQ01344 420 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 SRSF11Q05519 484 aaKnown RBP13.58□□□□□ -0.23
AFF3-201ENST00000317233 UBE3CQ15386 1083 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 KNOP1Q1ED39 458 aaKnown RBP13.58□□□□□ -0.23
AFF3-201ENST00000317233 KCNT1Q5JUK3 1230 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.23
AFF3-201ENST00000317233 EIF3HO15372 352 aaKnown RBP eCLIP13.58□□□□□ -0.23
AFF3-201ENST00000317233 CYP27B1O15528 508 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 NR3C2P08235 984 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 CRKP46108 304 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 PFKFB3Q16875 520 aaPredicted RBP13.58□□□□□ -0.23
AFF3-201ENST00000317233 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 ZNF655Q8N720 491 aaPredicted RBP13.58□□□□□ -0.23
AFF3-201ENST00000317233 MAGEE2Q8TD90 523 aaPredicted RBP13.58□□□□□ -0.23
AFF3-201ENST00000317233 OTUD5Q96G74 571 aa13.58□□□□□ -0.23
AFF3-201ENST00000317233 CTSHP09668 335 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 COPAP53621 1224 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 MTAPQ13126 283 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 PTK7Q13308 1070 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 DENND1BQ6P3S1 775 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 CYP4X1Q8N118 509 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 RNF149Q8NC42 400 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 ZNF354BQ96LW1 612 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 MANSC1Q9H8J5 431 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 C14orf93Q9H972 538 aaKnown RBP13.58□□□□□ -0.24
AFF3-201ENST00000317233 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 F5H5T6 163 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 ZNF208O43345 1280 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 RTN2O75298 545 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 SPAG6O75602 509 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 CKMP06732 381 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 FGD3Q5JSP0 725 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
AFF3-201ENST00000317233 EEF1AKMT1Q8WVE0 214 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 HIC2Q96JB3 615 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 ELOVL6Q9H5J4 265 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 JPH1Q9HDC5 661 aaPredicted RBP13.58□□□□□ -0.24
AFF3-201ENST00000317233 USP18Q9UMW8 372 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 PCDHB9Q9Y5E1 797 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 FAM20BO75063 409 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 MFAP3LO75121 409 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 FCGR1AP12314 374 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 SCP2P22307 547 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 HALP42357 657 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 DCTN2Q13561 401 aaKnown RBP13.58□□□□□ -0.24
AFF3-201ENST00000317233 PTPAQ15257 358 aa13.58□□□□□ -0.24
AFF3-201ENST00000317233 ZNHIT3Q15649 155 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms