RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 FAM102AQ5T9C2 384 aaPredicted RBP20.4■□□□□ 0.86
AP3S1-201ENST00000316788 LVRNQ6Q4G3 990 aa20.4■□□□□ 0.86
AP3S1-201ENST00000316788 CYP4V2Q6ZWL3 525 aaPredicted RBP20.4■□□□□ 0.86
AP3S1-201ENST00000316788 CEP57Q86XR8 500 aa20.4■□□□□ 0.86
AP3S1-201ENST00000316788 SPATA18Q8TC71 538 aa20.4■□□□□ 0.86
AP3S1-201ENST00000316788 TRAPPC12Q8WVT3 735 aa20.4■□□□□ 0.86
AP3S1-201ENST00000316788 HHIPL1Q96JK4 782 aa20.4■□□□□ 0.86
AP3S1-201ENST00000316788 LRRC37BQ96QE4 947 aa20.4■□□□□ 0.86
AP3S1-201ENST00000316788 HMGXB4Q9UGU5 601 aa20.4■□□□□ 0.86
AP3S1-201ENST00000316788 IQANK1A0A1B0GTG1 560 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 ASB14A6NK59 587 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 C2CD2LO14523 706 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 KRT16P08779 473 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 TXNP10599 105 aaKnown RBP20.39■□□□□ 0.86
AP3S1-201ENST00000316788 TGM2P21980 687 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 MAGEA6P43360 314 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 RBP5P82980 135 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 TMEM132DQ14C87 1099 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 SLC45A4Q5BKX6 768 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 FYB2Q5VWT5 728 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 C4orf22Q6V702 233 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 CHSY1Q86X52 802 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 MAP7D3Q8IWC1 876 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 FAM71DQ8N9W8 422 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 SHCBP1Q8NEM2 672 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 BRI3BPQ8WY22 251 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 APBB2Q92870 758 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 HPDLQ96IR7 371 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 TBCBQ99426 244 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 MYLK2Q9H1R3 596 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 PAK5Q9P286 719 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 RBPJLQ9UBG7 517 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 PCSK1NQ9UHG2 260 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 CHKBQ9Y259 395 aa20.39■□□□□ 0.86
AP3S1-201ENST00000316788 BANF1O75531 89 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 IL1BP01584 269 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 PGK2P07205 417 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 GJB1P08034 283 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 IQCF3P0C7M6 154 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 GAD2Q05329 585 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 SNAPC2Q13487 334 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 SLC10A6Q3KNW5 377 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 BBS9Q3SYG4 887 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 BOLA3Q53S33 107 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 CAPN12Q6ZSI9 719 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 FBXO16Q8IX29 292 aaPredicted RBP20.39■□□□□ 0.85
AP3S1-201ENST00000316788 SLC44A1Q8WWI5 657 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 HSPH1Q92598 858 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 CAPNS2Q96L46 248 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 RNF157Q96PX1 679 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 PEBP4Q96S96 227 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 CALN1Q9BXU9 219 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 RPL26L1Q9UNX3 145 aaKnown RBP20.39■□□□□ 0.85
AP3S1-201ENST00000316788 TEX264Q9Y6I9 313 aa20.39■□□□□ 0.85
AP3S1-201ENST00000316788 TCRBV7S3A2A0A539 114 aa20.38■□□□□ 0.85
AP3S1-201ENST00000316788 TRAFD1O14545 582 aaPredicted RBP20.38■□□□□ 0.85
AP3S1-201ENST00000316788 SLC18A2Q05940 514 aa20.38■□□□□ 0.85
AP3S1-201ENST00000316788 LAMC2Q13753 1193 aa20.38■□□□□ 0.85
AP3S1-201ENST00000316788 ZNF276Q8N554 614 aa20.38■□□□□ 0.85
AP3S1-201ENST00000316788 HEXIM2Q96MH2 286 aaKnown RBP20.38■□□□□ 0.85
AP3S1-201ENST00000316788 PTPN18Q99952 460 aa20.38■□□□□ 0.85
AP3S1-201ENST00000316788 SLCO1B3Q9NPD5 702 aa20.38■□□□□ 0.85
AP3S1-201ENST00000316788 SAR1AQ9NR31 198 aa20.38■□□□□ 0.85
AP3S1-201ENST00000316788 CCL15-CCL14A0A0B4J2E2 113 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 PRPSAP2O60256 369 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 GSTA2P09210 222 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 DHRS4L1P0CG22 281 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 TROVE2P10155 538 aaKnown RBP eCLIP20.37■□□□□ 0.85
AP3S1-201ENST00000316788 RASSF2P50749 326 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 CDH6P55285 790 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 EFTUD2Q15029 972 aaKnown RBP eCLIP20.37■□□□□ 0.85
AP3S1-201ENST00000316788 SEPT7Q16181 437 aaKnown RBP20.37■□□□□ 0.85
AP3S1-201ENST00000316788 CCL15Q16663 113 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 DARS2Q6PI48 645 aaKnown RBP20.37■□□□□ 0.85
AP3S1-201ENST00000316788 OTOAQ7RTW8 1153 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 CDR2LQ86X02 465 aaPredicted RBP20.37■□□□□ 0.85
AP3S1-201ENST00000316788 RXFP2Q8WXD0 754 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 SPOCK2Q92563 424 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 ERP27Q96DN0 273 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 MYCBPQ99417 103 aaPredicted RBP20.37■□□□□ 0.85
AP3S1-201ENST00000316788 NT5C1AQ9BXI3 368 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.37■□□□□ 0.85
AP3S1-201ENST00000316788 DERAQ9Y315 318 aa20.37■□□□□ 0.85
AP3S1-201ENST00000316788 BCLAF3A2AJT9 711 aaKnown RBP20.36■□□□□ 0.85
AP3S1-201ENST00000316788 INSRRP14616 1297 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 PDGFRAP16234 1089 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 OSBPP22059 807 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 VEGFBP49765 207 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 GTF2A2P52657 109 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 SNX16P57768 344 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 BASP1P80723 227 aaKnown RBP20.36■□□□□ 0.85
AP3S1-201ENST00000316788 ARHGAP1Q07960 439 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 TAF5Q15542 800 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 AGAP11Q8TF27 550 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 ETNK1Q9HBU6 452 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 TXNRD2Q9NNW7 524 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 GEMIN8Q9NWZ8 242 aaKnown RBP20.36■□□□□ 0.85
AP3S1-201ENST00000316788 NOP53Q9NZM5 478 aaKnown RBP20.36■□□□□ 0.85
AP3S1-201ENST00000316788 TGDSO95455 350 aa20.36■□□□□ 0.85
AP3S1-201ENST00000316788 MT-ND3P03897 115 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms