RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 PKDCCQ504Y2 493 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 PPP6R3Q5H9R7 873 aaPredicted RBP15.43■□□□□ 0.06
CLK4-201ENST00000316308 CENPUQ71F23 418 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 CATSPER4Q7RTX7 472 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 OR6B3Q8NGW1 331 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 DNAJB3Q8WWF6 145 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 TINF2Q9BSI4 451 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 CYP3A43Q9HB55 503 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 ALG13Q9NP73 1137 aaKnown RBP15.43■□□□□ 0.06
CLK4-201ENST00000316308 ITGA11Q9UKX5 1188 aa15.43■□□□□ 0.06
CLK4-201ENST00000316308 MYO18AQ92614 2054 aaKnown RBP15.43■□□□□ 0.06
CLK4-201ENST00000316308 WDR91A4D1P6 747 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 FAM155BO75949 473 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 RECQL4O94761 1208 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 ENDOD1O94919 500 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 ASMTLO95671 621 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 GSCP56915 257 aaPredicted RBP15.42■□□□□ 0.06
CLK4-201ENST00000316308 DARS2Q6PI48 645 aaKnown RBP15.42■□□□□ 0.06
CLK4-201ENST00000316308 PPIL6Q8IXY8 311 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 FITM2Q8N6M3 262 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 PCDH19Q8TAB3 1148 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 DENND1AQ8TEH3 1009 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 PYROXD1Q8WU10 500 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 ZC3H15Q8WU90 426 aaKnown RBP15.42■□□□□ 0.06
CLK4-201ENST00000316308 CNPY3Q9BT09 278 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 CD248Q9HCU0 757 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 ASNSD1Q9NWL6 643 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 WDR35Q9P2L0 1181 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 BPTFQ12830 3046 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 FAM47DPA6NHR8 397 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 RBL1P28749 1068 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 GRM5P41594 1212 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 HDAC4P56524 1084 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 BEX3Q00994 111 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 LACTB2Q53H82 288 aaPredicted RBP15.42■□□□□ 0.06
CLK4-201ENST00000316308 FUKQ8N0W3 1084 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 SLC35F5Q8WV83 523 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 EMID1Q96A84 441 aaPredicted RBP15.42■□□□□ 0.06
CLK4-201ENST00000316308 CCDC77Q9BR77 488 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 SNRNP25Q9BV90 132 aaKnown RBP15.42■□□□□ 0.06
CLK4-201ENST00000316308 USP29Q9HBJ7 922 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 CPA4Q9UI42 421 aa15.42■□□□□ 0.06
CLK4-201ENST00000316308 LAMA2P24043 3122 aaKnown RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 MEIS3P2A8K0S8 358 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 SMIM10L2AP0DMW4 78 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 SMIM10L2BP0DMW5 78 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 KRT4P19013 534 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 ELK3P41970 407 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 YARSP54577 528 aaKnown RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 PITX1P78337 314 aaPredicted RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 CCNA1P78396 465 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 SLC10A2Q12908 348 aaPredicted RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 CCL14Q16627 93 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 PRPF39Q86UA1 669 aaKnown RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 FAM228AQ86W67 206 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 PYROXD2Q8N2H3 581 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 ARRDC4Q8NCT1 418 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 SNX27Q96L92 541 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 KDM4CQ9H3R0 1056 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 ZNF638Q14966 1978 aaKnown RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 H7C0C1 242 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 MCF2LO15068 1137 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 TREHO43280 583 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 PRPSAP2O60256 369 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 LCP1P13796 627 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 ATP5OP48047 213 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 GRB14Q14449 540 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 NOMO1Q15155 1222 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 ZBTB6Q15916 424 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 KIF2BQ8N4N8 673 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 CCHCR1Q8TD31 782 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 KBTBD7Q8WVZ9 684 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 RNF157Q96PX1 679 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 PAFAH2Q99487 392 aa15.41■□□□□ 0.06
CLK4-201ENST00000316308 ZMYND8Q9ULU4 1186 aaPredicted RBP15.41■□□□□ 0.06
CLK4-201ENST00000316308 CA4P22748 312 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 ATP5DP30049 168 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 AFF1P51825 1210 aaKnown RBP15.4■□□□□ 0.06
CLK4-201ENST00000316308 KCNJ2P63252 427 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 GBE1Q04446 702 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 ITIH4Q14624 930 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 DGKDQ16760 1214 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 OLFML2BQ68BL8 750 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 CTU1Q7Z7A3 348 aaKnown RBP15.4■□□□□ 0.06
CLK4-201ENST00000316308 ANKS4BQ8N8V4 417 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 CCDC110Q8TBZ0 833 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 P3H4Q92791 437 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 PCDH18Q9HCL0 1135 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 KLC4Q9NSK0 619 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 ETNK2Q9NVF9 386 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 NKIRAS1Q9NYS0 192 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 SLC12A4Q9UP95 1085 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 EFR3BQ9Y2G0 817 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 KCNN4O15554 427 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 TYROBPO43914 113 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 P4HA1P13674 534 aa15.4■□□□□ 0.06
CLK4-201ENST00000316308 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms