RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ZNF197O14709 1029 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 AP5Z1O43299 807 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 F11P03951 625 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 PGFP49763 221 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 EPHA5P54756 1037 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 ARID5AQ03989 594 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 TAF10Q12962 218 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 TXNDC8Q6A555 127 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 LCLAT1Q6UWP7 414 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 OTOP3Q7RTS5 596 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 PIGZQ86VD9 579 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 FAM71AQ8IYT1 594 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 GJD3Q8N144 294 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 NUP93Q8N1F7 819 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 MAB21L3Q8N8X9 362 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 ANKRD52Q8NB46 1076 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 TTC16Q8NEE8 873 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 SLC20A1Q8WUM9 679 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 ZNF606Q8WXB4 792 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 FBXO32Q969P5 355 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 ACSF2Q96CM8 615 aaPredicted RBP8.3□□□□□ -1.08
CDC42-201ENST00000315554 FAM81BQ96LP2 452 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 GCNAQ96QF7 691 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 KXD1Q9BQD3 176 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 STK33Q9BYT3 514 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 SMOC2Q9H3U7 446 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 FAM124BQ9H5Z6 455 aaPredicted RBP8.3□□□□□ -1.08
CDC42-201ENST00000315554 CSNK1G1Q9HCP0 422 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 GMIPQ9P107 970 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 CHORDC1Q9UHD1 332 aaPredicted RBP8.3□□□□□ -1.08
CDC42-201ENST00000315554 CDH7Q9ULB5 785 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 KIAA1257Q9ULG3 409 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDC42-201ENST00000315554 NR2E1Q9Y466 385 aa8.3□□□□□ -1.08
CDC42-201ENST00000315554 DENND4AQ7Z401 1863 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 LAMP2P13473 410 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 LCP1P13796 627 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 YWHAQP27348 245 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 CDC25CP30307 473 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 SOX5P35711 763 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 VIPR2P41587 438 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 BCAT1P54687 386 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 JAM2P57087 298 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 PTK2Q05397 1052 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 BST2Q10589 180 aaKnown RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 CNGA2Q16280 664 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 FAM78AQ5JUQ0 283 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 PARM1Q6UWI2 310 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 CACNA2D4Q7Z3S7 1137 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 NOP9Q86U38 636 aaKnown RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 RNF135Q8IUD6 432 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 LEMD2Q8NC56 503 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 ZSCAN18Q8TBC5 510 aaPredicted RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 CPLX3Q8WVH0 158 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 MRPS31Q92665 395 aaKnown RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 FGF14Q92915 247 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 SLC22A12Q96S37 553 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 CYP2S1Q96SQ9 504 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 RPP25Q9BUL9 199 aaKnown RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 SLC46A2Q9BY10 475 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 ST7Q9NRC1 585 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.29□□□□□ -1.089e-7■■■■□ 20.1
CDC42-201ENST00000315554 UXTQ9UBK9 157 aaPredicted RBP8.29□□□□□ -1.08
CDC42-201ENST00000315554 PRKAG3Q9UGI9 489 aa8.29□□□□□ -1.08
CDC42-201ENST00000315554 NCANO14594 1321 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 C5orf42Q9H799 3197 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 A0A1W2PQC6 194 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 A0A1W2PQH9 124 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 XPO1O14980 1071 aaKnown RBP8.28□□□□□ -1.08
CDC42-201ENST00000315554 MED7O43513 233 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 RTN3O95197 1032 aaPredicted RBP8.28□□□□□ -1.08
CDC42-201ENST00000315554 PRAMEF12O95522 483 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 USP17L7P0C7H9 530 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 CYP11B1P15538 503 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 RFX1P22670 979 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 PBX1P40424 430 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 STAT1P42224 750 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 TKTL1P51854 596 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 KIF11P52732 1056 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 SLC8A3P57103 927 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 ADIGQ0VDE8 80 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 PKDCCQ504Y2 493 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 C6orf132Q5T0Z8 1188 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 TANGO2Q6ICL3 276 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 PMF1Q6P1K2 205 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 ARL14EPQ8N8R7 260 aaPredicted RBP8.28□□□□□ -1.08
CDC42-201ENST00000315554 C1orf131Q8NDD1 294 aaKnown RBP8.28□□□□□ -1.08
CDC42-201ENST00000315554 CLEC4CQ8WTT0 213 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 BAP1Q92560 729 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 RSPRY1Q96DX4 576 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 TTLL2Q9BWV7 592 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 COL25A1Q9BXS0 654 aaPredicted RBP8.28□□□□□ -1.08
CDC42-201ENST00000315554 PLA2G2FQ9BZM2 168 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 ULBP1Q9BZM6 244 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms