RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 RBBP8Q99708 897 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 YIPF2Q9BWQ6 316 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 SNTG2Q9NY99 539 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 WHRNQ9P202 907 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ATP11BQ9Y2G3 1177 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 PCDHB5Q9Y5E4 795 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 FAM86B1E9PN63 330 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 FAM86B2P0C5J1 330 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 AMPD2Q01433 879 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 EIF2B5Q13144 721 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ZNF284Q2VY69 593 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 SPOCD1Q6ZMY3 1216 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 STX19Q8N4C7 294 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ARMC2Q8NEN0 867 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ATG4AQ8WYN0 398 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 TSC22D3Q99576 134 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ILKAPQ9H0C8 392 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 TFR2Q9UP52 801 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 FRMPD4Q14CM0 1322 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ADGRA2Q96PE1 1338 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 CASTOR2A6NHX0 329 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 FKBP9O95302 570 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 RARGP13631 454 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 RAG1P15918 1043 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 SKOR1P84550 965 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 CHI3L2Q15782 390 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 CCNG2Q16589 344 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 RFX8Q6ZV50 586 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 FKBP9P1Q75LS8 142 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ZNF571Q7Z3V5 609 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 TRIM48Q8IWZ4 208 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ACTRT1Q8TDG2 376 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 ZNF556Q9HAH1 456 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 A1CFQ9NQ94 594 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 XPNPEP3Q9NQH7 507 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 TLR8Q9NR97 1041 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 CAPN6Q9Y6Q1 641 aa12.38□□□□□ -0.43
AMBRA1-201ENST00000314845 H2AFYO75367 372 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 JCHAINP01591 159 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CCR1P32246 355 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 MFSD10Q14728 455 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 C15orf52Q6ZUT6 534 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ZDHHC17Q8IUH5 632 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 VCPIP1Q96JH7 1222 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 FAR2Q96K12 515 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 OLFM3Q96PB7 478 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 PXDNQ92626 1479 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 AIM2O14862 343 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CRTAMO95727 393 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CNGA3Q16281 694 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 SGO1Q5FBB7 561 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 RETSATQ6NUM9 610 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 SLC47A2Q86VL8 602 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 HERC6Q8IVU3 1022 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 SGF29Q96ES7 293 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 MRPL9Q9BYD2 267 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 KCTD10Q9H3F6 313 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 TMEM51Q9NW97 253 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 RIMS1Q86UR5 1692 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 E2F8A0AVK6 867 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CSDE1O75534 798 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ARIH2O95376 493 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 PDHA1P08559 390 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 HSD17B3P37058 310 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 RAP1GAPP47736 663 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 RHOAP61586 193 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 HPCAP84074 193 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 TMEM119Q4V9L6 283 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 TRPM8Q7Z2W7 1104 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 HASPINQ8TF76 798 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ZNF606Q8WXB4 792 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 SPASTQ9UBP0 616 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 DCDC2Q9UHG0 476 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 VWDEQ8N2E2 1590 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 B2RBV5 119 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ADM5C9JUS6 153 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ALDH1A2O94788 518 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 MAP3K6O95382 1288 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CYP3A4P08684 503 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 HSPA1AP0DMV8 641 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 HSPA1BP0DMV9 641 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 KBTBD12Q3ZCT8 623 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 C11orf63Q6NUN7 778 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ARID3BQ8IVW6 561 aaPredicted RBP12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CARNMT1Q8N4J0 409 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 EMC1Q8N766 993 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CDCA5Q96FF9 252 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 ADGRE3Q9BY15 652 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 CLPBQ9H078 707 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 GGT7Q9UJ14 662 aa12.37□□□□□ -0.43
AMBRA1-201ENST00000314845 AKAP10O43572 662 aa12.36□□□□□ -0.43
AMBRA1-201ENST00000314845 SUPT7LO94864 414 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms