RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 ZDHHC11BP0C7U3 371 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 PTPN2P17706 415 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 YWHAQP27348 245 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 ITIH3Q06033 890 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 TAF10Q12962 218 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 CCDC85BQ15834 202 aaPredicted RBP13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 RAD9BQ6WBX8 426 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 MMS22LQ6ZRQ5 1243 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 ERICH1Q86X53 443 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 HS6ST3Q8IZP7 471 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 SMG7Q92540 1137 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 C18orf8Q96DM3 657 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 ULBP1Q9BZM6 244 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 HCFC1R1Q9NWW0 138 aa13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 EPN1Q9Y6I3 576 aaPredicted RBP13.31□□□□□ -0.28
CHMP2A-201ENST00000312547 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 PIK3R2O00459 728 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 NRG2O14511 850 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 TADA3O75528 432 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 FTLP02792 175 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 F11P03951 625 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 RHOP08100 348 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 LCP1P13796 627 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 SCNN1AP37088 669 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 CCR2P41597 374 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 PGFP49763 221 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 GSCP56915 257 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 SNX16P57768 344 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 DAOAP59103 153 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 NTHL1P78549 312 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 MRPS5P82675 430 aaKnown RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 CCZ1BP86790 482 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 CCZ1P86791 482 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 MTF1Q14872 753 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 TAF12Q16514 161 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 PRSS36Q5K4E3 855 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 OLFML1Q6UWY5 402 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 SCD5Q86SK9 330 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 XYLT1Q86Y38 959 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 DNAAF5Q86Y56 855 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 SCUBE3Q8IX30 993 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 SIX6OS1Q8N1H7 587 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 SMRP1Q8NCR6 262 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 MSANTD4Q8NCY6 345 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 CLEC4CQ8WTT0 213 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 OVCA2Q8WZ82 227 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 IRGQQ8WZA9 623 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 FBXO32Q969P5 355 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 MCRS1Q96EZ8 462 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 CORO1BQ9BR76 489 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 C11orf70Q9BRQ4 267 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 MIS12Q9H081 205 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 UBE2ZQ9H832 354 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 ASAH2Q9NR71 780 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 ADAM22Q9P0K1 906 aa13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 UXTQ9UBK9 157 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 MAGED2Q9UNF1 606 aaPredicted RBP13.3□□□□□ -0.28
CHMP2A-201ENST00000312547 BDP1A6H8Y1 2624 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 MTCL1Q9Y4B5 1905 aaKnown RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 TCRBV5S1A1TA0A578 114 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 FAM170AA1A519 330 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 ZNF840PA6NDX5 716 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 MOSPD3O75425 235 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 NDUFA10O95299 355 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 FGF19O95750 216 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 CALB1P05937 261 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 CYLC1P35663 651 aaPredicted RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 IFRD2Q12894 506 aaPredicted RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 ZNF268Q14587 947 aaPredicted RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 C2CD6Q53TS8 623 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 CYP4A22Q5TCH4 519 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 FAM183BPQ6ZVS7 135 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 GRASPQ7Z6J2 395 aaPredicted RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 ZDHHC17Q8IUH5 632 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 PDZD8Q8NEN9 1154 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 SUSD6Q92537 303 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 NDRG1Q92597 394 aaKnown RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 PIWIL1Q96J94 861 aaKnown RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 SLITRK1Q96PX8 696 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms