RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SAMD3Q8N6K7 520 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 TATDN2Q93075 761 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 MIEF2Q96C03 454 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 MROH7Q68CQ1 1323 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 PHF21AQ96BD5 680 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 OXNAD1Q96HP4 312 aaPredicted RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 MTMR2Q13614 643 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 KIZQ2M2Z5 673 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 FOXR1Q6PIV2 292 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 TSEN2Q8NCE0 465 aaKnown RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 TCP10LQ8TDR4 215 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 TADA1Q96BN2 335 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 CYP39A1Q9NYL5 469 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 DLGAP3O95886 979 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 PDGFRBP09619 1106 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 CPA3P15088 417 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 C4BPBP20851 252 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 THEMIS2Q5TEJ8 643 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 CDC42EP5Q6NZY7 148 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 FASTKD5Q7L8L6 764 aaKnown RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 ACTL9Q8TC94 416 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 AGBL1Q96MI9 1066 aa13.6□□□□□ -0.23
SNED1-201ENST00000310397 PIN4Q9Y237 131 aaKnown RBP13.6□□□□□ -0.23
SNED1-201ENST00000310397 FAM95CA0A1B0GW59 222 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 BCL10O95999 233 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 TFE3P19532 575 aaPredicted RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 BGNP21810 368 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 PAX7P23759 505 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 MRNIPQ6NTE8 343 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 KYAT3Q6YP21 454 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 FAM200BP0CF97 657 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 SLC1A6P48664 564 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 ZCCHC9Q8N567 271 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 SNRNP27Q8WVK2 155 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 RIOX1Q9H6W3 641 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 GIMAP4Q9NUV9 329 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 ERAP1Q9NZ08 941 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNED1-201ENST00000310397 RBP1P09455 135 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 TXNP10599 105 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 FASP25445 335 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 EPHB2P29323 1055 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 IFI35P80217 286 aaPredicted RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 STRA8Q7Z7C7 330 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 MPP4Q96JB8 637 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 ZNF668Q96K58 619 aaPredicted RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 DCLK3Q9C098 648 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 RPL26L1Q9UNX3 145 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 OGTO15294 1046 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 MPOP05164 745 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 RAB14P61106 215 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 NFIXQ14938 502 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 PCSK7Q16549 785 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 RNF43Q68DV7 783 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 SPOCD1Q6ZMY3 1216 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 CKAP2Q8WWK9 683 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 THUMPD3Q9BV44 507 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 NRDE2Q9H7Z3 1164 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 KCNK4Q9NYG8 393 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 STMN3Q9NZ72 180 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 GNL1P36915 607 aaPredicted RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 CACHD1Q5VU97 1274 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 CASP10Q92851 521 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 DUSP9Q99956 384 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 KLHL25Q9H0H3 589 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 MYLK2Q9H1R3 596 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 PCYOX1Q9UHG3 505 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 RUVBL2Q9Y230 463 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 SNX3O60493 162 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 SERPINE1P05121 402 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 CDK7P50613 346 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 RAD23AP54725 363 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 TTMPQ5BVD1 217 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 GLMNQ92990 594 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 USP13Q92995 863 aaPredicted RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 LRRC4BQ9NT99 713 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 DRG1Q9Y295 367 aaKnown RBP13.59□□□□□ -0.23
SNED1-201ENST00000310397 SPATA31D1Q6ZQQ2 1576 aa13.59□□□□□ -0.23
SNED1-201ENST00000310397 BTNL10A8MVZ5 291 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 KPNA4O00629 521 aaPredicted RBP13.58□□□□□ -0.23
SNED1-201ENST00000310397 TRDMT1O14717 391 aaKnown RBP13.58□□□□□ -0.23
SNED1-201ENST00000310397 HBP1O60381 514 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 UNC5CO95185 931 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 PTPN7P35236 360 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 PTRHD1Q6GMV3 140 aaKnown RBP13.58□□□□□ -0.23
SNED1-201ENST00000310397 RFWD2Q8NHY2 731 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 DLG3Q92796 817 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 GPRASP2Q96D09 838 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 TMEM237Q96Q45 408 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 CBWD1Q9BRT8 395 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 FAM49BQ9NUQ9 324 aa13.58□□□□□ -0.23
SNED1-201ENST00000310397 E2F8A0AVK6 867 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 FCHO1O14526 889 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 SUPT7LO94864 414 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 XRCC4Q13426 336 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 TP53BP2Q13625 1128 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms