RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
VPS41-202ENST00000310301 C3orf62Q6ZUJ4 267 aa8.49□□□□□ -1.05
VPS41-202ENST00000310301 SETD3Q86TU7 594 aaPredicted RBP8.49□□□□□ -1.05
VPS41-202ENST00000310301 FIBCD1Q8N539 461 aa8.49□□□□□ -1.05
VPS41-202ENST00000310301 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
VPS41-202ENST00000310301 DDX18Q9NVP1 670 aaKnown RBP8.49□□□□□ -1.05
VPS41-202ENST00000310301 KCND2Q9NZV8 630 aa8.49□□□□□ -1.05
VPS41-202ENST00000310301 STK39Q9UEW8 545 aa8.49□□□□□ -1.05
VPS41-202ENST00000310301 SLC16A4O15374 487 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 RHOBTB1O94844 696 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 HMOX2P30519 316 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 GALCP54803 685 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 PRKCEQ02156 737 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 SNX17Q15036 470 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 CYP4A22Q5TCH4 519 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 LPCAT2Q7L5N7 544 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 NLRP9Q7RTR0 991 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 PID1Q7Z2X4 250 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 CDH24Q86UP0 819 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 C7orf43Q8WVR3 580 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 ERP44Q9BS26 406 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 PLA2G6O60733 806 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 OR1G1P47890 313 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 ADARP55265 1226 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 PTPAQ15257 358 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 RSBN1Q5VWQ0 802 aaPredicted RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 OLFML1Q6UWY5 402 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 TRIM72Q6ZMU5 477 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 NDUFAF2Q8N183 169 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 GANCQ8TET4 914 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 TRIM63Q969Q1 353 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 DDX50Q9BQ39 737 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 PAIP1Q9H074 479 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 MFSD1Q9H3U5 465 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 HIPK3Q9H422 1215 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 RAD21L1Q9H4I0 556 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 TMBIM4Q9HC24 238 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 CYP26A1O43174 497 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 TPST1O60507 370 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 APRTP07741 180 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 PYGMP11217 842 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 GPC3P51654 580 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 SOX10P56693 466 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 TSGA10IPQ3SY00 556 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 SPDYAQ5MJ70 313 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 MEI1Q5TIA1 1274 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 BNIPLQ7Z465 357 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 FRMD5Q7Z6J6 570 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 SUGP1Q8IWZ8 645 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 KCNB2Q92953 911 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 MAGEB18Q96M61 343 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 SERPINB12Q96P63 405 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 KCNH7Q9NS40 1196 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 TRPV2Q9Y5S1 764 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 ALS2Q96Q42 1657 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 ADGRA3Q8IWK6 1321 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 PPM1AP35813 382 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 INAQ16352 499 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 FAM102AQ5T9C2 384 aaPredicted RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 TAS2R42Q7RTR8 314 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 MIEF2Q96C03 454 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 ELMO2Q96JJ3 720 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 A1CFQ9NQ94 594 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 RGL1Q9NZL6 768 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 SSU72P8A0A1W2PR75 194 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 KPNA4O00629 521 aaPredicted RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 SNRPAP09012 282 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 TAP1Q03518 808 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 LRRC74AQ0VAA2 488 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 NME3Q13232 169 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 BTBD8Q5XKL5 378 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 MOXD1Q6UVY6 613 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 ARID3BQ8IVW6 561 aaPredicted RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 ZFPM1Q8IX07 1006 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 EPS8L3Q8TE67 593 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 FAM118BQ9BPY3 351 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 NOL6Q9H6R4 1146 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 LMCD1Q9NZU5 365 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 LSM7Q9UK45 103 aaKnown RBP8.48□□□□□ -1.05
VPS41-202ENST00000310301 CDY2AQ9Y6F7 541 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 CDY1Q9Y6F8 540 aa8.48□□□□□ -1.05
VPS41-202ENST00000310301 ANKRD26Q9UPS8 1709 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TRIM24O15164 1050 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TLL1O43897 1013 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 UBOX5O94941 541 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PSMA4P25789 261 aaKnown RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 USP10Q14694 798 aaKnown RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 TATDN1Q6P1N9 297 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 SCN4BQ8IWT1 228 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 EIF2AK1Q9BQI3 630 aaKnown RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 GINS4Q9BRT9 223 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 ZSCAN32Q9NX65 697 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PRPF4O43172 522 aaKnown RBP eCLIP8.47□□□□□ -1.05
VPS41-202ENST00000310301 ARIH2O95376 493 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PGK1P00558 417 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 C4BPBP20851 252 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 KCNB1Q14721 858 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 EMC2Q15006 297 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 NAB2Q15742 525 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms