RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CUL2Q13617 745 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ZC3H12BQ5HYM0 836 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TJAP1Q5JTD0 557 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PDE12Q6L8Q7 609 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 FAM173BQ6P4H8 233 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ADGRF2Q8IZF7 708 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CDK20Q8IZL9 346 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 FEZF2Q8TBJ5 459 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 OSBPL6Q9BZF3 934 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM134Q9H6X4 195 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RAB6BQ9NRW1 208 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 UBR2Q8IWV8 1755 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SCN11AQ9UI33 1791 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TRAV19A0A0A6YYK7 116 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 EIF3HO15372 352 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 GLI1P08151 1106 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PAEPP09466 180 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ALOX15P16050 662 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ITGALP20701 1170 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CLK3P49761 638 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 VCPP55072 806 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 BNC1Q01954 994 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TROAPQ12815 778 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ITGADQ13349 1161 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ACVR2BQ13705 512 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 BBS9Q3SYG4 887 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PLPPR4Q7Z2D5 763 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC52Q8N7C0 313 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LINC00116Q8NCU8 138 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF555Q8NEP9 628 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RNF217Q8TC41 542 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 MGARPQ8TDB4 240 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC39Q96DD0 335 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 GPR20Q99678 358 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM39BQ9GZU3 492 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 JMJD4Q9H9V9 463 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 KRT82Q9NSB4 513 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 POLG2Q9UHN1 485 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HACD1B0YJ81 288 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SPAG7O75391 227 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 EOMESO95936 686 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CAPZA2P47755 286 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ARSEP51690 589 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HK2P52789 917 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RTP1P59025 263 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC41Q15345 812 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CLEC16AQ2KHT3 1053 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HP1BP3Q5SSJ5 553 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RASIP1Q5U651 963 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 MARC1Q5VT66 337 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CYP4Z1Q86W10 505 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 COL23A1Q86Y22 540 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 C2orf15Q8WU43 125 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SUSD6Q92537 303 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RNPC3Q96LT9 517 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 POP1Q99575 1024 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 REEP2Q9BRK0 252 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SPATA5L1Q9BVQ7 753 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PABPC3Q9H361 631 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ASAH2Q9NR71 780 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 DDIT4Q9NX09 232 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TLR7Q9NYK1 1049 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SLC27A6Q9Y2P4 619 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TNPO3Q9Y5L0 923 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RAMP2O60895 175 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 APOA1P02647 267 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 BLKP51451 505 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 OVOS1Q6IE37 1185 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PHACTR4Q8IZ21 702 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 STAMBPL1Q96FJ0 436 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HSFY1Q96LI6 401 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RIOX1Q9H6W3 641 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC40Q9H9A6 602 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SARS2Q9NP81 518 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PSMC3IPQ9P2W1 217 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 MRTO4Q9UKD2 239 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RTTNQ86VV8 2226 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SFI1A8K8P3 1242 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CFLARO15519 480 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 OR56A5P0C7T3 313 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RBP3P10745 1247 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 DARSP14868 501 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RASA1P20936 1047 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SP100P23497 879 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 GTF2E2P29084 291 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HSPA13P48723 471 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 IFT88Q13099 833 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 IRF5Q13568 498 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SLC12A1Q13621 1099 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ZSCAN26Q16670 478 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PSRC1Q6PGN9 363 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF467Q7Z7K2 595 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CAMK1DQ8IU85 385 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 MYO1HQ8N1T3 1032 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC43Q8N309 656 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 FIBCD1Q8N539 461 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HELQQ8TDG4 1101 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC46Q96FV0 321 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms