RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 TMEM62Q0P6H9 643 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 WDR72Q3MJ13 1102 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 ANKRD13AQ8IZ07 590 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 OR6P1Q8NGX9 317 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 RFWD2Q8NHY2 731 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 AGR3Q8TD06 166 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 WNK4Q96J92 1243 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 ZBTB45Q96K62 511 aaPredicted RBP9.63□□□□□ -0.87
XCR1-201ENST00000309285 VPS11Q9H270 941 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
XCR1-201ENST00000309285 CLIC5Q9NZA1 410 aa9.63□□□□□ -0.87
XCR1-201ENST00000309285 LOC100653049A0A140TA62 436 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 RBAK-RBAKDNI3L0D1 243 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KRT34O76011 436 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 FAM153BP0C7A2 387 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 OTUD4Q01804 1114 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 FAM153CQ494X1 144 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 SPIRE2Q8WWL2 714 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KIF12Q96FN5 646 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 MRPL1Q9BYD6 325 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 SHCBP1LQ9BZQ2 653 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 FAM153AQ9UHL3 310 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ITGB1BP2Q9UKP3 347 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CDV3Q9UKY7 258 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 ADM5C9JUS6 153 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KIAA0391O15091 583 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 GZMAP12544 262 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 C4BPBP20851 252 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 EPHB2P29323 1055 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 GSCP56915 257 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 VGLL4Q14135 290 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ASTE1Q2TB18 679 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 RNF220Q5VTB9 566 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 HORMAD1Q86X24 394 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CCDC103Q8IW40 242 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ASIC4Q96FT7 647 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KLF6Q99612 283 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 C2orf40Q9H1Z8 148 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 RNPEPQ9H4A4 650 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 RXFP1Q9HBX9 757 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 PHTF1Q9UMS5 762 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CAB39Q9Y376 341 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 WEE2P0C1S8 567 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 NNMTP40261 264 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 PDIA2Q13087 525 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 MXD4Q14582 209 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 STAT4Q14765 748 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 OASLQ15646 514 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 MFSD14CQ5VZR4 134 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ELMSAN1Q6PJG2 1045 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 JAMLQ86YT9 394 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CCNYL1Q8N7R7 359 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 PPM1NQ8N819 430 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CRYGNQ8WXF5 182 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 INPP4AQ96PE3 977 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 CYLDQ9NQC7 956 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 AFF4Q9UHB7 1163 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 ZNF180Q9UJW8 692 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 APPL1Q9UKG1 709 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ZNF536O15090 1300 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 TJP3O95049 919 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 DLGAP3O95886 979 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CALCAP01258 141 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 NAMPTP43490 491 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KRT17Q04695 432 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 STX3Q13277 289 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 LY6KQ17RY6 165 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 PPP1R2P3Q6NXS1 205 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KLRG1Q96E93 195 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ACAP3Q96P50 834 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ZSWIM1Q9BR11 485 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 ERP44Q9BS26 406 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 GCOM2Q9BZD3 368 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 KLC2Q9H0B6 622 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 DHX35Q9H5Z1 703 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 RNPEPL1Q9HAU8 725 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KLHL11Q9NVR0 708 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 HEY2Q9UBP5 337 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 SLC13A4Q9UKG4 626 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 AURKCQ9UQB9 309 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 NHSQ6T4R5 1651 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 KPNA2P52292 529 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 CAV1Q03135 178 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 TFDP2Q14188 446 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 FAM102AQ5T9C2 384 aaPredicted RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 DDI1Q8WTU0 396 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 CAVIN3Q969G5 261 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 SNF8Q96H20 258 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 TRAPPC9Q96Q05 1148 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 FAM118BQ9BPY3 351 aa9.62□□□□□ -0.87
XCR1-201ENST00000309285 PIN4Q9Y237 131 aaKnown RBP9.62□□□□□ -0.87
XCR1-201ENST00000309285 TCN1P20061 433 aaPredicted RBP9.61□□□□□ -0.87
XCR1-201ENST00000309285 RRM1P23921 792 aa9.61□□□□□ -0.87
XCR1-201ENST00000309285 HOXD10P28358 340 aa9.61□□□□□ -0.87
XCR1-201ENST00000309285 ARL4CP56559 192 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms