RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 C15orf39Q6ZRI6 1047 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 ZCCHC9Q8N567 271 aaKnown RBP10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 DNAJB3Q8WWF6 145 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 ATG4AQ8WYN0 398 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 NCSTNQ92542 709 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 SLC7A6OSQ96CW6 309 aaPredicted RBP10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 ERP27Q96DN0 273 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 TRIM11Q96F44 468 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 TTC25Q96NG3 672 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 OSMRQ99650 979 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 AP5M1Q9H0R1 490 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 CDT1Q9H211 546 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 PPCSQ9HAB8 311 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 PTPRHQ9HD43 1115 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 PCMTD2Q9NV79 361 aa10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
APOBEC3F-201ENST00000308521 T-ENOLP0DO92 83 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 MAGEA4P43358 317 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 MCL1Q07820 350 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 USP4Q13107 963 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 RASA2Q15283 850 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 TRIP13Q15645 432 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 AMHR2Q16671 573 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 IZUMO3Q5VZ72 239 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 RINLQ6ZS11 566 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 FAM47EQ6ZV65 393 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 ZNF365Q70YC5 407 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 ANKS1BQ7Z6G8 1248 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 RNF168Q8IYW5 571 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 KCNV2Q8TDN2 545 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 AGAP3Q96P47 875 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 HERPUD2Q9BSE4 406 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 RMI1Q9H9A7 625 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 ANAPC7Q9UJX3 599 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 F2P00734 622 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 CYP2C9P11712 490 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 SP100P23497 879 aaPredicted RBP10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 RRM1P23921 792 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 KLRC2P26717 231 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 GCAP28676 217 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 RAD23BP54727 409 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 TMED2Q15363 201 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 FSCN1Q16658 493 aaKnown RBP10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 CCDC142Q17RM4 750 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 GNASQ5JWF2 1037 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 LONP2Q86WA8 852 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 BRSK2Q8IWQ3 736 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 ZNF398Q8TD17 642 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 C10orf82Q8WW14 230 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 C17orf50Q8WW18 174 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 SOCS4Q8WXH5 440 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 TBC1D10AQ9BXI6 508 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 CYLDQ9NQC7 956 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 SAR1AQ9NR31 198 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 SUN2Q9UH99 717 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 LNPEPQ9UIQ6 1025 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 HAO1Q9UJM8 370 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 CPSF3Q9UKF6 684 aaKnown RBP10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 R3HDM2Q9Y2K5 976 aaKnown RBP10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 NUB1Q9Y5A7 615 aa10.79□□□□□ -0.68
APOBEC3F-201ENST00000308521 PSTPIP1O43586 416 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 TMCC1O94876 653 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 PROZP22891 400 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 PSEN2P49810 448 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 FCGRTP55899 365 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 CLDN10P78369 228 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 NCOA4Q13772 614 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 DEFB115Q30KQ5 88 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 SLC45A4Q5BKX6 768 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 WDR44Q5JSH3 913 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 CXCL17Q6UXB2 119 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 PHLDB2Q86SQ0 1253 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 MCOLN2Q8IZK6 566 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 CAPNS2Q96L46 248 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 PWWP2AQ96N64 755 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 CGRRF1Q99675 332 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 SSU72Q9NP77 194 aaKnown RBP10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 RNF186Q9NXI6 227 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 G3BP2Q9UN86 482 aaKnown RBP10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 HES2Q9Y543 173 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 LAMA2P24043 3122 aaKnown RBP10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 MROH7Q68CQ1 1323 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 TOMM70O94826 608 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 KRT19P08727 400 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 STAG3L1P0CL83 205 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 UNGP13051 313 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 TARSP26639 723 aaKnown RBP10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 PTPN4P29074 926 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 CDC25CP30307 473 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 GTF2H1P32780 548 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 MYL6P60660 151 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 DNAJC3Q13217 504 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 ZNF394Q53GI3 561 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 C2CD6Q53TS8 623 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 ENOSF1Q7L5Y1 443 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 C9orf72Q96LT7 481 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms