RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CYP1A1P04798 512 aaPredicted RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 GSTM1P09488 218 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 IDO1P14902 403 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 MCAMP43121 646 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 GSTM4Q03013 218 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 ACAP2Q15057 778 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TSNQ15631 228 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 DPP9Q86TI2 863 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 GJA10Q969M2 543 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 CHCHD6Q9BRQ6 235 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 IRX2Q9BZI1 471 aaPredicted RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 DCLK3Q9C098 648 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 SLC39A2Q9NP94 309 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 RIC1Q4ADV7 1423 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 C1orf167Q5SNV9 1468 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 ODC1P11926 461 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 IL4RP24394 825 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 VSNL1P62760 191 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 DLG4P78352 724 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PRKAA1Q13131 559 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 GIT2Q14161 759 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 POLD3Q15054 466 aaPredicted RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 ZNF655Q8N720 491 aaPredicted RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 GSTK1Q9Y2Q3 226 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TTC36A6NLP5 189 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 CSDE1O75534 798 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 KRT1P04264 644 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 ELF1P32519 619 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 SPANXN3Q5MJ09 141 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 MROH9Q5TGP6 573 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 MFSD14CQ5VZR4 134 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 RTL10Q7L3V2 364 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 RFX6Q8HWS3 928 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TRIM59Q8IWR1 403 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 RNF145Q96MT1 663 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 BCL7BQ9BQE9 202 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 DYRK4Q9NR20 520 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 COMMD3-BMI1R4GMX3 469 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 E2F6O75461 281 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PRDX6P30041 224 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 RRM2P31350 389 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 GRK3P35626 688 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 ZNF33BQ06732 778 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PDAP1Q13442 181 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 NIF3L1Q9GZT8 377 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 GPCPD1Q9NPB8 672 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 CLIC4Q9Y696 253 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 SLIT2O94813 1529 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 UBA6A0AVT1 1052 aaPredicted RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 VWA5AO00534 786 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TULP3O75386 442 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PSMC3P17980 439 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 GUCY1A2P33402 732 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 SESN3P58005 492 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 MRPL28Q13084 256 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 ZCWPW2Q504Y3 356 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TPCN2Q8NHX9 752 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 FCGR1BQ92637 280 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 ZBTB9Q96C00 473 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 CD320Q9NPF0 282 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 DMAP1Q9NPF5 467 aaPredicted RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 CHST12Q9NRB3 414 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 ZC3H4Q9UPT8 1303 aaKnown RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 TEX46H3BTG2 121 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ABRQ12979 859 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 HP1BP3Q5SSJ5 553 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 HYIQ5T013 277 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CCNI2Q6ZMN8 369 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 ITIH5Q86UX2 942 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TMEM174Q8WUU8 243 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 STAMQ92783 540 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 PPP1R16AQ96I34 528 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 GREM2Q9H772 168 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 PTPN22Q9Y2R2 807 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ZNF831Q5JPB2 1677 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 GSTA4O15217 222 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ATP4AP20648 1035 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ARFIP2P53365 341 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 HPCAP84074 193 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 UNC93AQ86WB7 457 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 C2orf69Q8N8R5 385 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 HSPH1Q92598 858 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 SLC9A7Q96T83 725 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 MKL2Q9ULH7 1088 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TRPM3Q9HCF6 1732 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 A0A087X1B8 175 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 URADA6NGE7 173 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 SLC26A3P40879 764 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ACTR2P61160 394 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 MESDQ14696 234 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 OLFML1Q6UWY5 402 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ADGRG6Q86SQ4 1221 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 SLC7A14Q8TBB6 771 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 NLRC4Q9NPP4 1024 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 AKT3Q9Y243 479 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 LYPLA2O95372 231 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CYP3A4P08684 503 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 RPL10AP62906 217 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms