RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TRIM8Q9BZR9 551 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PORCNQ9H237 461 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 MYMKA6NI61 221 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 C16orf96A6NNT2 1141 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 BMP10O95393 424 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ALOX15P16050 662 aaPredicted RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 S100A5P33763 92 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PEX19P40855 299 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 TWF1Q12792 350 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM47EQ6ZV65 393 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 LZTR1Q8N653 840 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ATP11CQ8NB49 1132 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 VMP1Q96GC9 406 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 KLHL11Q9NVR0 708 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ABI2Q9NYB9 513 aaPredicted RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SPATA31C2B4DYI2 1134 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 CCDC22O60826 627 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 CLASP2O75122 1294 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 LARGE1O95461 756 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 MAPK8P45983 427 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SERPINB4P48594 390 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ENPEPQ07075 957 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 CNTN1Q12860 1018 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 TRIM65Q6PJ69 517 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 EEF2KMTQ96G04 330 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ERGIC2Q96RQ1 377 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 WDCPQ9H6R7 721 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PSTPIP1O43586 416 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 AP1G2O75843 785 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PAEPP09466 180 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 LCP1P13796 627 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PDGFRAP16234 1089 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PSMA4P25789 261 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 NMT1P30419 496 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 LRRC8EQ6NSJ5 796 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ZNF720Q7Z2F6 126 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SLC35F6Q8N357 371 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 C11orf70Q9BRQ4 267 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ITGB3P05106 788 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ZNF286BP0CG31 522 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 NCAM1P13591 858 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 GTF2E2P29084 291 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 TMEM62Q0P6H9 643 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 USP39Q53GS9 565 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 C1orf146Q5VVC0 180 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 OTOP1Q7RTM1 612 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 HS6ST3Q8IZP7 471 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 TRPM4Q8TD43 1214 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ZCCHC2Q9C0B9 1178 aaKnown RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PTPRZ1P23471 2315 aaPredicted RBP8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 DDHD2O94830 711 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 FGRP09769 529 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 UCHL3P15374 230 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PPM1LQ5SGD2 360 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 ICA1LQ8NDH6 482 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 DEPDC7Q96QD5 511 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 CYTH2Q99418 400 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 PARVBQ9HBI1 364 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 DIABLOQ9NR28 239 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 FBXL5Q9UKA1 691 aa8.63□□□□□ -1.03
PCDHB1-201ENST00000306549 TBC1D4O60343 1298 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 FTCDO95954 541 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 GUCY1A2P33402 732 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 NR2C2P49116 596 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 OLFML2BQ68BL8 750 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 KRT77Q7Z794 578 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 ZFATQ9P243 1243 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 MEFVO15553 781 aaPredicted RBP8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 LGALS2P05162 132 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 CKBP12277 381 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 FLT3LGP49771 235 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 POU5F1Q01860 360 aaKnown RBP8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 SLC45A4Q5BKX6 768 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM133BQ5BKY9 247 aaKnown RBP8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 PID1Q7Z2X4 250 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 PASD1Q8IV76 773 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 OSBPL6Q9BZF3 934 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 GPR63Q9BZJ6 419 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 SMYD3Q9H7B4 428 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 AAR2Q9Y312 384 aaKnown RBP8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 DOCK2Q92608 1830 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 MMEP08473 750 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM9CQ8IZT9 166 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 ANKRD49Q8WVL7 239 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 PAK5Q9P286 719 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 HPS5Q9UPZ3 1129 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 SIPA1L3O60292 1781 aaPredicted RBP8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 CCDC189A1A4V9 331 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 FGGP02679 453 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 EIF4BP23588 611 aaKnown RBP8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 NPY2RP49146 381 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 LBX2Q6XYB7 198 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 ZBED8Q8IZ13 594 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 PPM1NQ8N819 430 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
PCDHB1-201ENST00000306549 RPS6KB2Q9UBS0 482 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms