RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 VCPIP1Q96JH7 1222 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 CEP295NLQ96MC4 621 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 ADAM33Q9BZ11 813 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 ULBP1Q9BZM6 244 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 LACRTQ9GZZ8 138 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 THAP2Q9H0W7 228 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 S1PR5Q9H228 398 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 IGFLR1Q9H665 355 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 NMUR1Q9HB89 426 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 SEPT11Q9NVA2 429 aaKnown RBP9.99□□□□□ -0.81
RFX3-201ENST00000302303 HCFC1R1Q9NWW0 138 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 DNMT3BQ9UBC3 853 aaKnown RBP9.99□□□□□ -0.81
RFX3-201ENST00000302303 CDH22Q9UJ99 828 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 SALL4Q9UJQ4 1053 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 TMEM59LQ9UK28 342 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 PCDHA13Q9Y5I0 950 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.99□□□□□ -0.81
RFX3-201ENST00000302303 DOCK6Q96HP0 2047 aa9.99□□□□□ -0.81
RFX3-201ENST00000302303 ATP8B3O60423 1300 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 YJEFN3A6XGL0 299 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 E7ENQ6 273 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 PRRG1O14668 218 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 CCL16O15467 120 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 TBX10O75333 385 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 MOSPD3O75425 235 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 F11P03951 625 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 POU2F2P09086 479 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 USP17L7P0C7H9 530 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 ZDHHC11BP0C7U3 371 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 LCP1P13796 627 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 ELF1P32519 619 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 CCR2P41597 374 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 EPHA5P54756 1037 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 DAOAP59103 153 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 MRPS5P82675 430 aaKnown RBP9.98□□□□□ -0.81
RFX3-201ENST00000302303 ZNF268Q14587 947 aaPredicted RBP9.98□□□□□ -0.81
RFX3-201ENST00000302303 PLEKHA7Q6IQ23 1121 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 CCDC149Q6ZUS6 474 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 DENND5BQ6ZUT9 1274 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 FAM183BPQ6ZVS7 135 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 GAREM2Q75VX8 874 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 HS6ST3Q8IZP7 471 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 DEFB123Q8N688 67 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 C18orf8Q96DM3 657 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 TRMT2BQ96GJ1 504 aaKnown RBP9.98□□□□□ -0.81
RFX3-201ENST00000302303 MSLNLQ96KJ4 702 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 C11orf70Q9BRQ4 267 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 MIS12Q9H081 205 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 ST7Q9NRC1 585 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 ZDHHC7Q9NXF8 308 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 ADAM22Q9P0K1 906 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 COG5Q9UP83 839 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 SCML2Q9UQR0 700 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 DUSP10Q9Y6W6 482 aa9.98□□□□□ -0.81
RFX3-201ENST00000302303 CCDC195A0A1B0GUA6 201 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 ANKRD62A6NC57 917 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 PJA2O43164 708 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 ATMINO43313 823 aaPredicted RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 ZBED1O96006 694 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CYP1A2P05177 515 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 HNRNPA1P09651 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
RFX3-201ENST00000302303 IGFBP4P22692 258 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CYLC1P35663 651 aaPredicted RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 ARHGAP25P42331 645 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 MAGEA1P43355 309 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 ACADSBP45954 432 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 NSFP46459 744 aaKnown RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 ALDH1A3P47895 512 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 TAF10Q12962 218 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 MAMLD1Q13495 774 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 TCEAL1Q15170 157 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 PPM1LQ5SGD2 360 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 SNX30Q5VWJ9 437 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 ANKRD54Q6NXT1 300 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CMASQ8NFW8 434 aaPredicted RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 JOSD2Q8TAC2 188 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 PRKD2Q9BZL6 878 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 TRIM7Q9C029 511 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 DEF6Q9H4E7 631 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CNGB3Q9NQW8 809 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 COMMD8Q9NX08 183 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CEP83Q9Y592 693 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 MYH10P35580 1976 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 ZNF638Q14966 1978 aaKnown RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 PTMAP06454 111 aaKnown RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 H2AFZP0C0S5 128 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 TMEM253P0C7T8 217 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CSH1P0DML2 217 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CSH2P0DML3 217 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 ABCB4P21439 1286 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 YWHAQP27348 245 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 RFC1P35251 1148 aaPredicted RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 EPHB3P54753 998 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 SLC8A3P57103 927 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 RPL7AP62424 266 aaKnown RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 NTHL1P78549 312 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 SLC6A3Q01959 620 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 OGDHQ02218 1023 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms